<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07285

Description Uncharacterized protein
SequenceMTTPPPEATSHFLDNRNAAMTSLEGQLHALESALDDLNAARRVPPSLRLGITNATSDLNSWEYSIQRLTGSIVDLGKQDALGKATELVDAGVEPIDRSAARRVILHSRQDDNTLPPVPHSQATTPFPTEDKLLPTEWTLEQEGPYTLRDLKVLVRSYNNGDGGVRIRFWASARSKSPTALRPAALHVLIDNVLQAFIILNPSSSADTTGMTVDRVSCFAPHEAKPPSGNSTYNVYQSITRYFSVLLSTEPDLTPRNILDILLTYRTLFRDKCGLCGTELSADGRVPPVGRIWKRKDGNTDGSESGGTWTPRHVQCMSAFY
Length320
PositionTail
OrganismCalocera cornea HHB12733
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Dacrymycetes> Dacrymycetales> Dacrymycetaceae> Calocera.
Aromaticity0.07
Grand average of hydropathy-0.387
Instability index46.50
Isoelectric point6.18
Molecular weight35156.14
Publications
PubMed=26659563

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07285
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.15|      18|      18|     114|     131|       2
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  110-  128 (29.29/16.96)	DDNtLPPVPHSQATTPFPT
  129-  147 (27.86/15.80)	EDKlLPTEWTLEQEGPYTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.69|      26|     240|      36|      61|       3
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   36-   61 (47.97/22.55)	DLNAARRVPPSLRL.....GITNATSDLNSW
  278-  308 (42.72/19.51)	ELSADGRVPPVGRIwkrkdGNTDGSESGGTW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07285 with Med27 domain of Kingdom Fungi
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