<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07278

Description Uncharacterized protein
SequenceMAEGDFEPPSVYELRPPEWLPKAHTTADVGYMGFYPPRPDEDEEVLTETNIKNGFVLNLSVPAETYSTQDTIRNSLIHENALGELENLMEQIFIRRAENFASPVPASTFRLPSRVTLNDMKRKAWFADLANPDVPLYKLGKNVPHGAKGHDLLDLLHTNNVAIPRAVWFLRVFGGNETAGLRNKPGYNPTQYSVEWANVVTGYLKKQLADIALPTAPRPGLNIKQTFKSVLADPDSRERWISRFTYSLELLRTFYAEGLVDNRTFLTWLVQQMCSCNLAQLGFVVRLADEYLDGMLVSRALTHHFIDACLSKVVEIRTASARDHLVNVETLIKNLILRAFLALPDAFVSPRTWLAYGELLEEDLIGGGAVDSSDSILQQNANTLRQSLQDSLSDVRRRNEAMIFRHLPPRVVGSLTSALSDIKLLNSLSGKTNMDSIVFFDNLPDSQSSFTRKLDILLTWSVTPLQYGDHRPYAAGCLLGAWREKAGERAIRHEAASPDEYLQDQLFDWLDCSADADNSDNIPAVTLLFGQLVKRGLFSYQQYMQRLIARGEPGISYNQEGRSRHLELLRCIPLHSADSSLISQRKVTLYGVRARETLEDTNEREIRKELRALFPELFGGIPSSSETLTAKLRENCPTLLSACRYEQVKTVKQWLLPILQKHSSQAAAAGGKDILITYTLAAVLMARTKCYGSMLDLTLHTLKHAATFELMTAVIRTLRQHMEIWACMNVMKIISTALYSAHDAWRGNGIRIRALLFVLMEFDNGQYLSPEQREQVLSDITQYSHALHPIGPFSNPVPAVLPEILLLAADPHPDAPSNLAENLWYKYMKAEDWAWKVWDNTIASLRQIPVMIPDIEGRRVCALRYAQFLWHVDQHLPRGLDAHILDWLLGAGKNEIAALTPEAWDVVIVVLLHLCAYGALETTTILQGLIYPVWQASALVTSTEQGSALEIRLAAVNGLFNHLLIKDECGTGLPPMNIFEAQGLQTRRRDVFREPHFSPLVDNLSMLVLVEHNPSLAEHLRTQTSSLRETICRIDVFRQGVYRDLDAVRYAFEKLLENGSIAEDMHEPLVAALRLMLRNPEEADDGIGFVSVSSLLTPWKLAATSIEIRLTLKQLGESLARESTRHAANMTLDKLTAFVFKHCRTSEEVDFVAEMMTEVSREVAGKFVNAGLRRMVELFKGPYNPPRMDEVGDFVTNAGEVLRLLSKIVERFREDTSLPPLIPATQNQFMEALDTRLTQVKDVLVAEQDGVTDEEITSPASHCAILLCRLLQFVFGFPEAWTPQVKNMSESLCNTIVQLALVHGEGFDIGLVAFPLLLDTLYFVLDEIPSDPKLTTLDPFYRYPNLEPRSFSPDMPLEYQSRLRALLPYTALNATVSNLSYATRDPSGALAITQPVQNRPWEWTEYLGDIPPGEANLRHEDRPEERLPLRNTASISLELFGTRQTGDHIVHVTEDSMTEATIKTFQDNLSSESIFMRDWRETRVFDDEVISKSRSENEDDPPMSSAFATAQSPSQTQSERPSSSSRRGSPALSARSGRASLPNSGSSIRQSPAQQHPLSKLSASTASEPIDVDAFDISAVAGGSKRKQVDDDMDVEVVEGPARTYKKQKAKVSAKVRVKKR
Length1621
PositionKinase
OrganismLaetiporus sulphureus 93-53
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Polyporales> Laetiporus.
Aromaticity0.08
Grand average of hydropathy-0.223
Instability index45.53
Isoelectric point5.61
Molecular weight181791.07
Publications
PubMed=26659563

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07278
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.47|      38|      42|    1113|    1152|       1
---------------------------------------------------------------------------
 1113- 1152 (55.16/44.39)	KQLGEsLARESTRHAANMTLDKLTAFvFK....HCRTSEEVDFV
 1154- 1195 (58.31/37.56)	EMMTE.VSREVAGKFVNAGLRRMVEL.FKgpynPPRMDEVGDFV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     136.17|      37|      41|      87|     126|       2
---------------------------------------------------------------------------
   61-   82 (23.32/ 9.41)	.................VPAETYSTQDTIR.NS..LIHENAL
   87-  126 (54.06/46.89)	NLMEQIFiRRAENFasPVPASTFRLPSRVTLND..MKRKAWF
  131-  169 (58.78/39.34)	NPDVPLY.KLGKNV..PHGAKGHDLLDLLHTNNvaIPRAVWF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.06|      21|      39|     388|     408|       3
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  388-  408 (36.81/27.29)	LQDSLSDVRRRNEAMIFRHLP
  424-  444 (36.24/26.74)	LLNSLSGKTNMDSIVFFDNLP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.25|      22|      41|    1356|    1384|       5
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 1356- 1383 (31.64/25.07)	PLEYQSRLRALLPYTAlnatvsNLSYAT
 1400- 1421 (44.61/20.14)	PWEWTEYLGDIPPGEA......NLRHED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.58|      39|      44|     988|    1028|       8
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  988- 1028 (60.25/55.78)	RRDVFREPHFSPLvDNLSMLV..LVEhNPSLAEHLRTQ.TSSLR
 1033- 1074 (59.33/43.63)	RIDVFRQGVYRDL.DAVRYAFekLLE.NGSIAEDMHEPlVAALR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07278 with Med12 domain of Kingdom Fungi
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