<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07273

Description Uncharacterized protein
SequenceMASKGGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRRFNDPSVQSDMKLWPFKVIPGPGEKPMIVVNYKGESKQFAAEEISSMVLIKMREIAEAFLGHSVNDAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKSSNRGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFRRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFKKCMDPVEKCLRDSKIDKAQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEANEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELTGIPPAPRGVPQINVVFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDEKIAGKLDAGDKEKIESAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQGGGGDVPMGGAGDMPGGGYGGSGGSSGAGPKIEEVD
Length653
PositionUnknown
OrganismDaucus carota subsp. sativus (Carrot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Apiales> Apiaceae> Apioideae> Scandiceae> Daucinae> Daucus> Daucus sect. Daucus.
Aromaticity0.06
Grand average of hydropathy-0.378
Instability index31.03
Isoelectric point5.19
Molecular weight71225.86
Publications
PubMed=27158781

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07273
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.13|      42|      74|     480|     528|       1
---------------------------------------------------------------------------
  480-  528 (62.86/52.61)	NVVFDIDANGILNvsaedktAGVKNKI.TITN......DKGRLSK.DEIEKLVKEAE
  556-  605 (53.28/32.03)	NTIKDEKIAGKLD.......AGDKEKIeSAVNeaiewlEKNQLAEvDELEDKLKELE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.35|      42|     188|     120|     224|       2
---------------------------------------------------------------------------
  169-  212 (66.63/128.91)	GLNVMRIINePTaAAIAYGLDKKSSN.RGE.....QNVLIFD.....LG....GGTFDV
  361-  417 (51.72/ 6.55)	GKELCKSIN.PD.EAVAYGAAVQAAIlSGEanekvQDLLLLDvtplsLGletaGGVMTV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.32|      17|      74|      69|      86|       3
---------------------------------------------------------------------------
   46-   64 (21.20/ 8.15)	FtDTERLIGDAAkNQVAMN
   70-   86 (31.11/16.76)	F.DAKRLIGRRF.NDPSVQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07273 with Med37 domain of Kingdom Viridiplantae
Unable to open file!