<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07259

Description Enoki mushroom
SequenceMETDQPSMSPPIEEVVQQMEEETNVTSPKPSPVADLPTPKAESPKEALQEKEEGETEVKQESESQFERDAEKKSEVEPEREPERQLGKEDVPEEETVKEPERTEAEEVKATTLTPVVVPQPPQEKREEILEQRSPANYLVGPVNAPTTPSSCQQVPPVTVSVPLMSGRNGSSCALISSPSLGVYTPESSTGSVQSIHGMTGSEEVISASCVESPRSLPSQELPPTPTPHVSQYSSDFASPTAVSNATTVSSISPTFAWPASTTAASAVTATPATTAAAATAAAAAAATTTTAAAAATTTTQQQQQQHQQHQQQQQQQQQQQQQQHQQHHQQQQQRTHHRSRSHPHQHMSSPQQLQPQQTKPQQHMAMHHAPSPQPQHHHQQQHQQQQQQHLIHHQQHQHQQQQQQQQQQQQQQQQQQQQQQHAMFQSGFSAMGPGGYGFPSHLHASAGYISAMHSPHAPMSMGYSTNPGVVPPTATPSPAPSPAASSFMPVPPVPAMPTVIQQSGKQRRSSSTHRYTPIAPAPPSHTSNSTIISPSVTTPSAGYYNQHPAAAQPQVPVARPASQYLPPAQSPSHPTPPTSTSSTTATAPSCSLAKLQQLTNGLADSASPHHTMTPPPNQTPPPPPPSHLHGLSHSRDPYGYGVVPTPPPSAIPSQQSYAKYYQGSVPSPIPVSSSPVAGLNTPSSVVHSNNSELTSTHTGSGHNVNAAGQSGRSSSSTAAAPPPSSSVGRNSNNSSSQQRQATDAATQQRQAQQLMQQSYAAMNQLNGYRMSMAGMAGMPGMPGMPGMGMPSMSMMAAQHQALNSASYIAAANPGFMNQSQLGVMNMHAHAAAAHAAQHPHSAPHSHSAAAQAAQYQQVDQRTGTPAGMYSAPYAYGIPQLPQLNGTMRR
Length890
PositionKinase
OrganismDaphnia magna
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Crustacea> Branchiopoda> Diplostraca> Cladocera> Anomopoda> Daphniidae> Daphnia.
Aromaticity0.03
Grand average of hydropathy-0.836
Instability index87.56
Isoelectric point6.52
Molecular weight94817.05
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07259
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     561.20|      73|      91|     301|     373|       1
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  301-  370 (121.86/28.26)	.........QQQQQQHQQHQQQQQ..............QQQQQQQQQHQ..QHHQQQ.QQRTHHRSRS.H.............PHQHMS.....SPQQLQPQ..QT.....KP.QQHMAMHHA
  400-  492 (72.65/12.55)	...........QQQQQQQQQQQQQ..............QQQQQQQQQHAmfQSGFSA.MGPGGYGFPS.HlhasagyisamhsPHAPMSmgystNPGVVPPT..ATpspapSP.AASSFMPVP
  493-  571 (72.43/12.48)	PVPamptviQQSGKQRRSSSTHRY..............TPIAPAPPSHT..SNSTII.SPSVTTPSAG.Y.............YNQH........PAAAQPQvpVA.....RPaSQYLPPAQS
  572-  635 (79.19/14.64)	PS................HPTPPT..............STSSTTATAPS..CSLAKL.QQLTNGLADSaS.............PHHTMT.....PPPNQTPP..PP.....PP.SHLHGLSHS
  645-  719 (71.23/12.10)	PTP..ppsaIPSQQSYAKYYQGSV..............PSPIPVSSSPV..AGLNTP.SSVVHSNNSE.L.............TSTHTG.....SGHNVNAA..GQ.....SG.RSSSS..TA
  720-  795 (82.78/15.79)	AAP......PPSSSVGRNSNNSSS..............QQRQATDAATQ..QRQAQQlMQQSYAAMNQ.L.............NGYRMS...maGMAGMPGM..PG.....MP.GMGMPSMSM
  796-  872 (61.07/ 8.86)	MAA......QHQA...........lnsasyiaaanpgfMNQSQLGVMNM..HAHAAA.AHAAQH.PHS.A.............PHSHSA.....AAQAAQYQ..QV...dqRT.GTPAGMYSA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.70|      17|      19|     263|     280|       2
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  232-  248 (26.08/10.16)	QYSSDF.ASPTAVSNATT
  263-  280 (22.62/11.85)	TAASAVtATPATTAAAAT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      98.75|      19|      19|      71|      89|       3
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   53-   69 (22.18/ 7.84)	EGETEVK..QESESQFERD
   71-   89 (31.26/14.73)	EKKSEVEPEREPERQLGKE
   93-  107 (20.26/ 6.39)	EE....ETVKEPERTEAEE
  108-  126 (25.05/10.02)	VKATTLTPVVVPQPPQEKR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.88|      18|      34|     148|     181|       5
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  148-  171 (28.96/17.10)	TPSSCqqvppvTVSVPLMSGRNGS
  185-  202 (33.92/22.66)	TPESS......TGSVQSIHGMTGS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.11|      13|      19|       2|      14|       7
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    2-   14 (24.78/12.42)	ETDQPSMSP.PIEE
   22-   35 (19.34/ 7.70)	ETNVTSPKPsPVAD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07259 with Med12 domain of Kingdom Metazoa
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