<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07233

Description Uncharacterized protein
SequenceMSEKKKQHHHQHKNRILSSSSPPPPASPNTLQPSSLVSSPVSTSTMDDYSWGNRSTGLTPSANPLPPPLSPMEVVNDRFIHEAGPPTALSILRTQPAFIGKLYKMLEDGSQDLICWSSTGDYFSVYNSALFSKEILPQYFKHNNWQSFVRQLNMYGFSKINEMIHSNISVDNQTWDFKHPHFKRGDFQSLILVKRKPVRPSPTSVSGNISNSTTSSALVPSSPYMPAPNNGMFSPDERTRSSSSSSSSSSSSYQQQQQQQHQQLQQEQHEHTMEEEGSVENRVLQLDEQVYRVSNNVNLLTHEIHDIKSLIQRQQTMIHDLANLVRSYNGKWSLIYEGLGLIRTFLFFTDASSSKTVAKMLSSSSNTSSLENPRPRNTSLPSIHNLAGDLDTVTNTQQRAHDRHHHHHQHHPHHQQQQQQQQQQQQQQQQQSHPLNATSFFNINSSGPSLPHLHRRRSASPPLTDHHQRRRSSHPSSASRTSHPIHPLLNSNPNDDEDPEHDYDDGDMMDENH
Length513
PositionTail
OrganismAbsidia glauca (Pin mould)
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Cunninghamellaceae> Absidia.
Aromaticity0.06
Grand average of hydropathy-0.970
Instability index73.23
Isoelectric point6.96
Molecular weight58212.29
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
DNA-binding transcription factor activity	GO:0003700	IEA:InterPro
sequence-specific DNA binding	GO:0043565	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07233
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     512.06|     140|     163|     121|     280|       1
---------------------------------------------------------------------------
    7-  112 (105.21/30.30)	..............................................................QHHH....QHKNRILSSSSPPPPAspntlqPSSlVSSPVSTSTmddyswgnRSTGLTPSANPLPPP....LSP...............MEvvNDRFIHEAGPPTALSILRTQPAFIGKL.......YKMLEDGSQD
  121-  280 (226.38/101.60)	DYFSVYNS.ALFSKEIlpqyfkHnNWQSFV.RQlnmygfskiNEMIH..SN.ISVDNQTWDFKHPHfkrgDFQSLILVKRKPVRPS......PTS.VSGNISNST........TSSALVPSSPYMPAPNNGMFSP...............DE..RTRSSSSSSSSSSSSYQQQQQQQHQQLQQEQHE.HTMEEEGSVE
  289-  436 (180.48/60.66)	QVYRVSNNvNLLTHEI......H.DIKSLIqRQ.........QTMIHdlANlVRSYNGKWSLI........YEGLGLI.RTFLFFT......DAS.SSKTVAKML........SSSS.NTSSLENPRPRNTSL.PsihnlagdldtvtntQQ..RAHDRHHHHHQHHPHHQQQQQQQQQQQQQQQQQsHPLN......
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07233 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSEKKKQHHHQHKNRILSSSSPPPPASPNTLQPSSLVSS
2) SPTSVSGNISNSTTSSALVPSSPYMPAPNNGMFSPDERTRSSSSSSSSSSSSYQQQQQQQHQQLQQEQHEHTMEEEGSVENRVLQ
3) VAKMLSSSSNTSSLENPRPRNTSLPSIHNLAGDLDTVTNTQQRAHDRHHHHHQHHPHHQQQQQQQQQQQQQQQQQSHPLNATSFFNINSSGPSLPHLHRRRSASPPLTDHHQRRRSSHPSSASRTSHPIHPLLNSNPNDDEDPEHDYDDGDMMDENH
1
201
357
39
285
513










Molecular Recognition Features






MoRF SequenceStartStop




1) MSEKKKQHHHQHKNRIL
1
17