<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07214

Description Uncharacterized protein
SequenceMAGRHQAQYARYSSSNPSYPNTGGGNSSNSSNLNIPYPPSQNNNAPYNQQQQQQHSHQQQQQQQAYGNAASMASPYSTNSTSSPGGYHSPNITPRNNQNRPLKKYILHPPAGVMPLSKTMPSLGFPGMFPQRPGQDEDIMTESNMRHGFVDRPVVSNEHTCAHDIVYGKLQDDQRLLNELGSFMVDVLQRQSRAGCITGPSSFKPPIRTTLIDSKREQWMQELAGGIVPLKQLARNVPHGFKGEKLLETLAAKQVPFLRATWYIKIVGLSEMSQRSASNAATSVGPQPVQWTATVTTHLKKQLNELMPPLTNNSTNAASPHPTAGTPGRGYKNYNASNHHDNNAPKPWTSPENRARFEHRWSYSVKLARWQYFEGLLDQRTFLKFTLDTLAQSGSFEIMWLVLTGIVQDYVDEYKRNRTLTKLLIETLIKSYSAFIRQSAPDANALTVHYGLQKDIEHLLQSLFLSTPDMFVVPKLYHQYRYLFNSILGDESRQKPSKSLPDVCRVMKEYWTMIKARNEVFCGTLEENEMKSDQHPVDMDSKTQPNDSIPPDAVAAASSTLSSSASTTMSEAVYEERVVHVLDSIGRHVDSITGLLLDNDTWMDIKGHTAKSASKSIFGTTRLQPQALIKLITIMCRWATSESRYGDWKPYLVASILLSWREQDKSSDNKVLLQDALIRFLDDEACPKASETALDSQALDQDPVEKTNTPVIYLFDVLIRLQLFSYQKYLLRLIARGDLEPKRRHVKQIQQCLHHLASFPLLHPAPPYLINQRRVALYGTRSDSDSKEEVESLERLKHLARLAVTGFDHHDTDCLFGAEAQEMTQPVPTDSMQSYELSLTEDIKGEFISAMDATSRYSMLNFTSWLLNEVKRFVVKSIQIGEDNWRVMTSPGSCLLNTRQFVTIIRIMECAKDYLTITEVTLWVLEKSNDPVLYPYIIDTLRKYSNYWKLTNSGTRVANAVWAKHLNLANRGNRERCIMMYMVQLVQEGYQMDDLVRTQLKQDLQVKSKLRGRYSSSVSVKDELVQLAKEPATSSLQLVSESLSVPSQNATGWIGAILESAGEVLRMVAKEKHITEQAKSHQLPFSPALYDFHRIVRAFANVLKDVSNHTTLTGQADEVVIHWLCNNEIVLQDMNHECSWVPFFVVILVAYNVISLSNVVKEFALPWFEQVNRDCQQHYGAEESNLVVFCQNLIALIRLLIIQTSNQPKSEEETPHTVHWQLRVEDFYRLQVQRQSQLASSLDRIEPMFGLMERLVMIATSLPLSSNLLQDLVMLRADLLQITWFRQACLRDLNGVYQRFAAREAEAAMEKRMKKKMLDIVDELIGGNSLVNERQGAIVHETTPDFVDKLHRVFLNVSQWNEAQCRVQVNLLLDNISLSDGHSQNPNNPHILGDDISMDMTPTESVSSSNKDLQSFVYFFYDVVLADGKEESDPVKAQRRFQFFKNLIHELREPVLLELLHHGARLLEGDPSQQFPENVLLMHTTDPGQHFDSVKYAYRSQAFLNITQHMLAENVWSNEKKIELVKTVFGQITRFKNSLSIYRVMQGANVCYADAANALQLVKSNVDMAIALLVTEGLGENTGEETEKDLKLSLQDIRNSLLVRLRLVVPFASLIWEHPKADECDIMEWIKVLVPLLGNPIVHGNGSQERFFEFVLDFVSLLIDEVPKDLKKKSLLLLGSMHNELTSVPAMFHSRVKRIMPFLTHNLYLANTRLASSMLGLPPTNDPQQQQQHLETCLEQSKPWEWLEDYASEPPHDNDAPISLSLFNARKSKRVDNTYVRWFKFGFDEGSGSRRRRLNQDTAHIASIEVDKNKQDSNTDENGFIFIVDDEEMESNTSTPHHAKKRKVEMEEGELP
Length1856
PositionKinase
OrganismMucor circinelloides f. lusitanicus CBS 277.49
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Mucor.
Aromaticity0.08
Grand average of hydropathy-0.412
Instability index46.39
Isoelectric point6.26
Molecular weight211090.36
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07214
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     179.45|      57|     166|     477|     538|       1
---------------------------------------------------------------------------
  477-  538 (89.68/72.29)	YHQYR.YLFNSILgdESRQKPSKSlPDVCRVMKEywTMIKARNEVFCGTLEENEMKS...DQHPVD
  645-  705 (89.77/54.34)	YGDWKpYLVASIL..LSWREQDKS.SDNKVLLQD..ALIRFLDDEACPKASETALDSqalDQDPVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.04|      28|     217|     706|     737|       2
---------------------------------------------------------------------------
  706-  737 (35.29/39.12)	KTNTPVIYLFdVLIRLQlfSYQKYlLRLIARG
  927-  954 (52.74/36.13)	KSNDPVLYPY.IIDTLR..KYSNY.WKLTNSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     214.34|      47|     282|      29|      77|       3
---------------------------------------------------------------------------
   29-   75 (86.27/47.62)	NSSNLNIPYPPSQNNNAPYNQ.QQQQQHSHQQQQQQQAYGNAASMAS..P
  313-  355 (64.28/32.51)	NSTNAASPHPTAGTPGRGYKNyNASNHHDN...NAPKPWTSPENRA....
 1716- 1755 (63.79/34.92)	.SSMLGL..PPT...NDP....QQQQQHLETCLEQSKPWEWLEDYASepP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     232.68|      74|     217|     550|     641|       4
---------------------------------------------------------------------------
  109-  184 (130.11/78.14)	PPAGVMPLSKTMPSLGFPGMfpQRPGQDEDI..MTESNMRH.....GFV...DRPVVSNEHT..CAHDIVYGKLQDDQRLLNELGSFM
  550-  635 (102.57/101.96)	PPDAVAAASSTLSSSASTTM..SEAVYEERVvhVLDSIGRHvdsitGLLldnDTWMDIKGHTakSASKSIFGTTRLQPQALIKLITIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     266.71|      90|     661|     772|     873|       7
---------------------------------------------------------------------------
  772-  873 (128.65/138.14)	QRRVALYGTRSdSDSKEEVeSLERLKHLARLaVTGfdhhDTDCLFGAEAQEM..TQP.VPTDSMQ.SYE....LSLTEDIKGEfisamDATSRYSMLNFTSWLLNEVKRF
 1438- 1535 (138.06/105.47)	QRRFQFFKNLI.HELREPV.LLELLHHGARL.LEG....DPSQQFPENVLLMhtTDPgQHFDSVKyAYRsqafLNITQHMLAE.....NVWSNEKKIELVKTVFGQITRF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07214 with Med12 domain of Kingdom Fungi
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