<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07210

Description Uncharacterized protein
SequenceMNQNFVGQPNAEDIRALEGLRRGLVPMIAAMDRLKRDMDFKMSQGGAVDWPQIQRTTAAVNSHITSLNIFINGGRKHALETRKTDAGKVLKNRQGGDEMRYTDTTIPPQADTIRNLHPFPIAPFPNTNEHLAGLAQTLLRKRLEPTEEKWIEDRLSKALEFASVPPEWGIEPKKTNDKETPKESDDDVDGDPTRLLNRYSKRTKGTLTEEQLVQRWNTAHTWFFNPPQTSFDEEEYASGEEGEEEDDDEGQEFEDAMNTPVPDASAAQPTTQEGPAKSAAPPPPVVMVQEAEPPVHRPVPGTPVLELGLIQRFMATGQL
Length319
PositionHead
OrganismDidymella rabiei (Chickpea ascochyta blight fungus) (Mycosphaerella rabiei)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Pleosporales> Pleosporineae> Didymellaceae> Ascochyta.
Aromaticity0.06
Grand average of hydropathy-0.821
Instability index49.92
Isoelectric point4.87
Molecular weight35653.35
Publications
PubMed=27091329

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07210
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     178.40|      54|      59|     129|     187|       1
---------------------------------------------------------------------------
  133-  187 (89.94/54.43)	GLAQTLLR...KRLEP..TEEKWIEdRLSKALEFASVPPEWGIEPKKTNDKETPKESDDD
  190-  248 (88.46/42.33)	GDPTRLLNrysKRTKGtlTEEQLVQ.RWNTAHTWFFNPPQTSFDEEEYASGEEGEEEDDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.44|      46|     172|      78|     127|       2
---------------------------------------------------------------------------
   78-  127 (71.60/49.16)	ALETRKTDAGKVLKNRQGGDEmryTDTTIPPQADTIRNLHPfPI.APFPNT
  256-  302 (78.84/42.07)	AMNTPVPDASAAQPTTQEGPA...KSAAPPPPVVMVQEAEP.PVhRPVPGT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07210 with Med8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FASVPPEWGIEPKKTNDKETPKESDDDVDGDPTRLLNRYSKRTK
2) RWNTAHTWFFNPPQTSFDEEEYASGEEGEEEDDDEGQEFEDAMNTPVPDASAAQPTTQEGPAKSAAPPPPVVMVQEAEPPVHRPVPGTPVLELGLIQR
3) TRKTDAGKVLKNRQGGDEMRYTDTTIPPQADTIRNLHPFPIA
161
215
81
204
312
122










Molecular Recognition Features






MoRF SequenceStartStop




NANANA