<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07167
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MAEGSETAANASGLFGPRDPVFRPWPVRDRTPTTIAEFVQRVKAQGGEFRQLTEAGLRAEIDEQQRKREAGEGEDDGDGDNDATAESLDASRGQHDKDDVDIAGGKPKDIEAMIAKRDEILMVLESALQSGLIAVDFVSLLLSKDRPTHAVQTLSPLLREKVGIGTLSAGRVANAAQAARALQTKNHGGGGGGGGSMSAAERQSLDETTRSNAQRLLDHKTECVGWQLLAMDRAAALLAAGRKRLRTEMRREERYWSEVVAVHDRGWGLSRMPGQRRVLRVKFGFSESATDLRAAGFAPLRRVKRGHVALDMAALGPPCALVVTLRRRPQGGSSAATTTTTTGRSVPPARLPATAALEDRIREARNTIYAKELWRELNREARQMVAHGVVFRDGALIFPVGGHTVGTITLEPLQLAATAAVADGADNEPPLDAILTELAETMTSSLHLFLAHGHRQHYRQRSVPTPPTDSTGAPPPTYFMLRPLLANQKYEKAIEHLAQFLADLCSILHGVGQTGARFMLYERPLASFLPPPPPPPPPPAGAASADGIKETAARTNQRQSASEGLCTGFLAPREFTFELTLGPDVRLSIRSRTTVAPLKTQYLVQLVKPSAAPAPAPHAPDSLSASENNHDINRLLSQLFPPADNYGTLRDVLDYVGDVVARVLTARARSFANAAEAQADTGVAWGTAVDGMALLRTNSPFRMLRFCVVPTNAVTKLDALVDELANELAGEQTSGDRNGSGGSGSARHAWFGGNDDNDDVIVGDNNEDDNDQVQSFQSDSNADSPLQQLVRPELRMYASWPLSHADAAIYRRWAWNADAEASPGASLHDLVEGCVRGDLMPATEPKAE |
Length | 848 |
Position | Head |
Organism | Sporothrix insectorum RCEF 264 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Sordariomycetidae> Ophiostomatales> Ophiostomataceae> Sporothrix.
|
Aromaticity | 0.05 |
Grand average of hydropathy | -0.386 |
Instability index | 47.28 |
Isoelectric point | 5.89 |
Molecular weight | 91305.43 |
Publications | PubMed=27071652
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP07167
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 158.03| 53| 67| 329| 393| 1
---------------------------------------------------------------------------
309- 377 (70.90/45.35) ALDMAALGppcalvVTLRR....rPQGGSSAATTTtttgrsVPPARLPATAALEDrirEARNTIYAKELWREL
381- 438 (87.13/44.99) ARQMVAHG......VVFRDgalifPVGGHTVGTIT......LEPLQLAATAAVAD...GADNEPPLDAILTEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 129.26| 38| 67| 464| 502| 2
---------------------------------------------------------------------------
464- 502 (65.40/43.33) PTPPTDSTGAPPPTYFMLRPLLANQKyEKAIEHL.AQFLA
533- 571 (63.86/37.25) PPPPPPPAGAASADGIKETAARTNQR.QSASEGLcTGFLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.37| 23| 23| 70| 92| 4
---------------------------------------------------------------------------
70- 92 (38.16/23.20) AGEGED.DGDGDNDATAESLDASR
94- 117 (35.21/20.80) QHDKDDvDIAGGKPKDIEAMIAKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 200.85| 63| 67| 619| 685| 6
---------------------------------------------------------------------------
619- 685 (94.58/73.35) APDSLSASENNHDInRLLSQLFPPADNYGTLRDVLDYVGDVVARVLTARARsfaNAAEAQADTGVAW
688- 750 (106.26/69.43) AVDGMALLRTNSPF.RMLRFCVVPTNAVTKLDALVDELANELAGEQTSGDR...NGSGGSGSARHAW
---------------------------------------------------------------------------
|