<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07157

Description Uncharacterized protein
SequenceMVMSYQQETIWASVIELTKLAQHKLTDPLTWAVQLSSSLSSAGVSLPSIEAAKLIVDYICWENSVPITWKFLEMALSMKILPPMLVLALLSVRVVPCRRRQPAAYRIYMELLKRHGFSLSSQINGQHHLKIMESVDDVLHLSKSFGLEAREPGILVVEFVFSIVWQLIDASLDDEGLLELAPRKDCKWPIKSQDMEIDDNNYFDEKTAERHEGLRKMNTLLAIEVTGDLFRDKVTSRILYLAQRNMPANWESFKEGLKILAAKSSALRISKNITADALLQLTSDAHRVFARDCNRSSHQQFHAVMASSLLIFSSAQCRGATHSALWLPIDIFLEDTMDGSQVVATSATETVIGLVKALKAVNQTTWNDAFLGLWIAALRLVQRERDPSEGPVPRLDTCLCLLLSITPLAIINIIEEVENSAIDEAEHCPTNKKNGKQVRGDIRNDLISSVQQLGHYEGLLTPPGSVSSVANQAAAKAMMFLSGLTVGSGYLDGVTLCDMPVSCAGNMRHLIVEACIARNLLDTSAYTWPGYVNGRSNEIPRSVTGQMPGWLSLMKGSPLTPSLISALVKTPASSLSELEKVYEIAINGSDEEKISATTILCGASLTRGWNIQEHTVVFITRLLSPPVPAENSGGSYLIPCAPYLNVIFLGVTTVDCVQIFSIHGLIPELAGALMPLCEFFGSCSPSISWTLKSGEELTPHAVFSNAFTLLLKLWRFYQPPLEHVMADKALVGTQMTPEDLLHVCNSRLASVGNSRQEPTKRLSRLTSMPSTEPIFMDSFPKLKLWYRQHQACIASPLSSLVPGTPVYQIFDGLLNMMFRKVNKSGQPLTPTTSGSSNSSGSAVEDISLRIKVPAWDILEAVPFVLDASLTACAYGKLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGLWKPASMNGTDWPSPAANLAMIEQHIHKILADTGVDVPSLGPVGSAPATLPLPLAALVSLTITYKLDRETDRYLNLVGPALNTLAAGCPWPCMPIIASLWAQKVKRWSDFLVFSASNNVFQHDSQAVVQLLRVCFRSTLGLNSSPLLNSGGVGALLGHGFGSHISGGLAPVAPGILYLRVHRSVRNVMFMSKEIVTLLMDSVKDIATRGLPTEKPEKQTNARHGMRFNEVSLAAAMARVKLAATLGASIVWITGGADFVHSLIKEYLPTWFISVHESAHEKGESEGILARLRGYALAYFSMLSGTFALGIGSAITAPKRRPHVLGKHLAFIASALDGKISLGCCEATWRAYVTGFVTLIVGCAPAWMLDVDIKILKSLSNGLRKWGEEELDLDLLAVSGSRAMGAAAELIIENRF
Length1326
PositionTail
OrganismDaucus carota subsp. sativus (Carrot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Apiales> Apiaceae> Apioideae> Scandiceae> Daucinae> Daucus> Daucus sect. Daucus.
Aromaticity0.07
Grand average of hydropathy0.148
Instability index40.00
Isoelectric point6.70
Molecular weight144558.86
Publications
PubMed=27158781

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07157
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     311.48|      94|     732|     449|     551|       1
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  449-  551 (150.34/140.83)	SVQQLGHYEGllTPPGSVSSVANQAAAKAMMfLSG.LTVGSGylDGVTLCDMPVSCAGNMRHLIVEACIARNLLDTSAYTWPGYVNGrsneIPRSVTGQMPGWL
 1184- 1278 (161.15/120.40)	SVHESAHEKG..ESEGILARLRGYALAYFSM.LSGtFALGIG..SAITAPKRRPHVLGKHLAFIASALDGKISLGCCEATWRAYVTG....FVTLIVGCAPAWM
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     496.88|     126|     129|     556|     681|       2
---------------------------------------------------------------------------
  556-  680 (202.73/133.29)	.............GSPLTPSL.............ISALVKTPASSLSE.LEKVYEIAINGSDEEKISATTILCG.ASLTRGWNIQEHTVV..F...ITRLLS.PPVPAENSGGSYLIPCAPYLNVIFLGVTTVDCVQI.FSIH.GLIP.ELAGALM...PLCEFF
  681-  810 (150.03/96.38)	GscspsiswtlksGEELTP................HAVFSNAFTLLLK.LWRFYQPPL.....EHVMADKALVG.TQMT....PEDLLHV..C...NSRLASvGNSRQEPTKRLSRLTSMPSTEPIFM..DSFPKLKLwYRQHqACIA.SPLSSLVpgtPVYQIF
  812-  963 (144.12/92.25)	GllnmmfrkvnksGQPLTPTTsgssnssgsavedISLRIKVPAWDILEaVPFVLDASLTACAYGKLSPRELATGlKDLADFLPASLATIVsyFsaeVTRGLW.K..PASMNGTDWPSP.AANLAMIEQHIHKILADTG.VDVP.SLGPvGSAPATL...PL....
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     256.39|      85|     904|      64|     155|       3
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   64-  155 (129.66/95.26)	SVPITWKF.LEMALSMKILPPMLVlALLSVRVVPCrrrQPAAYRIYMELLKRHG....FSLSSQInGQHHLKIMESVDDVL............................HLSKsfGLEAREPGIL
  970- 1087 (126.73/73.16)	SLTITYKLdRETDRYLNLVGPALN.TLAAGCPWPC...MPIIASLWAQKVKRWSdflvFSASNNV.FQHDSQAVVQLLRVCfrstlglnsspllnsggvgallghgfgsHISG..GLAPVAPGIL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07157 with Med33 domain of Kingdom Viridiplantae
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