<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07146

Description Uncharacterized protein
SequenceMEESETVEGLLPLPSPVVAIAINGNSNSKYIVQWALDKFVPEGNVFKLLYVRPRITAVPTPMGNFIPISEVRDDVVATYIKEVEWQTDEKLIPYKKMCAQRKVQVEVLQIEADDVVNAIVGEVARCKIKRLVIGASSRGIFSRARRLSSRISEGTPSYCTVYAISKGKLSSVRPSDSETSGNMKDDTSDTSCSTSSSSRYSFSSQAEWTEADSVSPYSHFRSPSLPMQRLQALSTVNQTFYHTKANSVNFDHSRNVSFDTERTSKFASSRPSYEDLDYAELSSSRHLVTDSNQLTSEQASTSSAPPIKYSSESEVNVSFELEKLKIELRHIQGMYALAQSETMDASRKEHTACACCSLHFVNKEAKLNDLNKQRLEEAVKLREIKDKEEEARELAKQETEKYRAAKTEANYVNECAEREILERKEAEGRAFRETREKEKLEKALDGSVQQYQTFTWEEIVSATLSFSEDLRIGMGSYGTVYKGSLHHTTAAIKVLHSEEVHRTKEFLQEVEILSKIRHPHLLILLGACIDHGCLVYEYMENGSLEERLFRKNNTPAIPWFERYRIAWEVASALVFLHHAKPKQVIHRDLKPANILLDHNLVSKIGDVGLSTMRPLDSTTISTTYRNTGPVGTLSYIDPEYQRTGLVSPKSDVYAFGMVLLQLLTAKPAIALTHLVEKAIDDDKLTEMLDPEAGNWPIEETKELALLGLSCAELRRRDRPDLKDHVLPALERLRDIADKARDLVSNGQTPPSHFICPILREVMDDPHVAADGYTYDLKAIKKWFEENDKSPMTNIPMPSKSLIPNHTLSSAIMEWKEGKQ
Length819
PositionTail
OrganismDaucus carota subsp. sativus (Carrot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Apiales> Apiaceae> Apioideae> Scandiceae> Daucinae> Daucus> Daucus sect. Daucus.
Aromaticity0.07
Grand average of hydropathy-0.472
Instability index44.13
Isoelectric point5.93
Molecular weight92408.58
Publications
PubMed=27158781

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07146
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      89.87|      25|      25|     149|     173|       1
---------------------------------------------------------------------------
  121-  145 (21.43/ 9.41)	..........GEVARCKIKrlvigASSRGIFSRAR
  149-  173 (41.65/24.85)	SRIS.....EGTPSYCTVY.....AISKGKLSSVR
  177-  204 (26.79/13.50)	SETSgnmkdDTSDTSCSTS.....SSSRYSFSS..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.29|      15|      21|     362|     376|       2
---------------------------------------------------------------------------
  362-  376 (24.38/16.02)	NKEAKLNDLNKQRLE
  386-  400 (23.90/15.57)	DKEEEARELAKQETE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.92|      10|      24|      36|      45|       3
---------------------------------------------------------------------------
   36-   45 (17.68/11.44)	LDKFVPEGNV
   62-   71 (18.24/12.05)	MGNFIPISEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.79|      16|     115|     415|     433|       4
---------------------------------------------------------------------------
  408-  423 (27.47/22.35)	EANYVNECAEREILER
  427-  442 (26.32/12.05)	EGRAFRETREKEKLEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      99.51|      27|      31|     250|     280|       5
---------------------------------------------------------------------------
  217-  242 (37.94/22.41)	.YSHFRSPSLPMQR.LQALS..TVNQTF....YH
  249-  279 (41.23/35.04)	NFDHSRNVSFDTER.TSKFA..SSRPSYedldYA
  280-  305 (20.34/ 7.31)	ELSSSRHLVTDSNQlTSEQAstSSAP........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.47|      15|      15|     620|     634|       7
---------------------------------------------------------------------------
  620-  634 (26.95/19.13)	ISTTYRNTGPVGTLS
  636-  650 (27.53/19.71)	IDPEYQRTGLVSPKS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.62|      12|      15|     708|     720|       8
---------------------------------------------------------------------------
  708-  720 (18.82/16.05)	LSCAElRRRDRPD
  726-  737 (20.79/12.36)	LPALE.RLRDIAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.96|      14|      19|     565|     578|      10
---------------------------------------------------------------------------
  565-  578 (24.48/15.67)	IAWEVASALVFLHH
  585-  598 (24.49/15.69)	IHRDLKPANILLDH
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07146 with Med32 domain of Kingdom Viridiplantae
Unable to open file!