<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07145

Description Uncharacterized protein
SequenceMAITSCQINWDNVLEFTKIAQHKGDDPMLWAIQLSSNLNSAGVSLPSPQLATLLVSHICWDNNVPVAWKFLEKALVFNIVPPILVLALLSKSIIPERHSQPAAFRLYMELLKRHAFTLISQLKWPNSHMIINSVDKVLQLSELFGVPAGEPGILVVEFIFSIAWQLLDAALDDEGLLELAPKKKFGWIFKPENMDIDGQGNYNEKRTTHQERLKSVNTVMAIELFGQFLQNKATFGMLHLARRNMPAHWRDFIEHVQLLIVNSSALRNSKVMTPELLVQLISATRKVMSRECKTSYLQEFQEILACDPLASSAGLCHGTSRSAIWLPLDLVLEDAMDASQVNATSAIEIVTGSVKALQAMSGSTWYDCFLGLWMAALRLVQRERDPIEGPVPHLVTRLSMLLSIATLVIVNLIKEEEIALTAEAEVHNEKHSKERVPGKRRRDLVTCLQKLGDFKTLLTPPESVIPAANQAAAKAMMFIATINAGNAYSDCASIKDTSIKCSGNLHHLIIEACIARKLLDTSVYFWPGYVNGLTDQISHNVPVQVPGWSSFMKGGQLTPVVINALVSSPASSFAELDKIFEIAVQGSDDDKTTAATILCGASLNCGWNVQEHTVYFITRLLCLPVPADYSGTDSHLIRYAPMLNVLLVGIATVDCVQIFSLHGLVPQLAGALMPICEVFGSCVPNVSWTSATGEEISAHAVFSNAFALLLMLWRFNHPPLEHGVGEVPPVGTQLTPEYLLQVRNSQLVCNENVYWDQNRRRLAADANSSLSEPIFVDTFPKLKVWYRQHLACIASPLSGLVHGTPVHQIVNDLLTMMFKKIINNGNQTMTSAISGSTASSEIGKETGSRPMLAGWDILEAVPFVVDAALTACAHGRLSPRELCTGLKDLADFLPASLASIVSYFSAEVSRGVWKPVFMNGVDWPSPAANLANVEEQIKKILAATGVDVPSLVAGGSSPATLPLPLAAFVSLTITYKLDKDSQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLIFSASRTVFLHDNGAVIQLLKSCFTAALGLKSSLTSSSGGVGPLLGHGFESQSHGELSPVAPGILYLRSYRSIRDIIFMREEIISLLMQSVKDIVCNGFRRERIAKLKKAKNGMKYGQVSLATVMTKVKLAASLAATLAWFGGIQLVQSLIKETLPSWFISVHRSQHEDDAGGAVAMLGGYALAHFALLCGALAWGVDTSSSASKRRPKILGYHMEFLASALDGKISLGCDPATWRAYVSGFSSLMVGCTPNWLSELDVQVLKRISKGLMHWNEELALSLLAAGGVGTMGAAAELIGQSSL
Length1323
PositionTail
OrganismDaucus carota subsp. sativus (Carrot)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Apiales> Apiaceae> Apioideae> Scandiceae> Daucinae> Daucus> Daucus sect. Daucus.
Aromaticity0.08
Grand average of hydropathy0.202
Instability index42.53
Isoelectric point6.73
Molecular weight144081.55
Publications
PubMed=27158781

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07145
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     220.37|      71|      93|      66|     145|       1
---------------------------------------------------------------------------
   66-  145 (100.91/97.32)	VAWKFLEKAL....VFNIVPPiLVLALLSKsiiPERHSQPAAFRlYMEllKRHafTLISQLKWPNSHMIINSVDKVLQLSELFG
  162-  236 (119.46/82.19)	IAWQLLDAALddegLLELAPK.KKFGWIFK...PENMDIDGQGN.YNE..KRT..THQERLKSVNTVMAIELFGQFLQNKATFG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.02|      28|      53|    1139|    1171|       2
---------------------------------------------------------------------------
 1139- 1171 (37.15/33.45)	GQVSLatvMTKVKLA..ASLAATLAWfgGIQLVQS
 1195- 1224 (44.86/25.06)	GAVAM...LGGYALAhfALLCGALAW..GVDTSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.32|      21|      47|     938|     958|       3
---------------------------------------------------------------------------
  938-  958 (35.30/16.97)	KKILAATGVDVPSLVAGGSSP
  982- 1002 (40.02/20.19)	QRFLNLAGPALESLAAGCPWP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.48|      27|      47|     380|     407|       4
---------------------------------------------------------------------------
  380-  407 (42.84/32.50)	VQRERDPIEgPVP.....HLVTRLSMLLSIATL
  426-  457 (42.65/26.97)	VHNEKHSKE.RVPgkrrrDLVTCLQKLGDFKTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.99|      26|      47|    1063|    1088|       7
---------------------------------------------------------------------------
 1063- 1088 (45.88/34.16)	VGPLLGHGFESQSHGELSPVAPGILY
 1113- 1138 (44.10/32.51)	VKDIVCNGFRRERIAKLKKAKNGMKY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      68.47|      21|      46|     674|     694|      10
---------------------------------------------------------------------------
  674-  689 (26.95/12.92)	.............................P.ICEVFGS...CVPNVSWT
  690-  732 (17.67/ 6.04)	SATGEeisahavfsnafalllmlwrfnhpP.LEHGVGE....VPPVG.T
  733-  756 (23.85/10.63)	QLTPE.........................yLLQVRNSqlvCNENVYWD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07145 with Med33 domain of Kingdom Viridiplantae
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