<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07136
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLMLENGMNGSMQVDQLDVDDLFGDGVGLSLHTARPPTKHLRQRVDELRTRGCCQGVAWSRSGAIASISPDGKTLEARFLRSHPDDGNWGLSEPTKVDLITINASSPIVHLAWASTASPELAVIDATGRVAILTYSITLNRPFATRKWDHDPSDDLHAIVGSYWLPLAPQAKQYYVSHGPAVKDGNQYRYESSFVHAYGPWHPNPSKSALLCVTTNGHLKMFWAQNNNKIEETTLELESVNSSDDLITHAALHSDKSNLWVALATTSKQLRLVRVGINWGLPQSQSDNKPPPGSQALNPTMQEKHVAISSWLPSGSSTTPIDSAANQLTHLEILPSTLDHTGQGWAPLIILAVRTYLPTPSTPYQETQSIIDKWEVLNDQAQSLHPAFEQLGSRRNSTGAAPAPTSRLKKHESVVVNKVIVGVHSLQYGRVICLAFSDGSVEYRDRFTLQEIYNEMNLDRVMTLNQVGFTFQDESPCLQMAFSPTNCSIVKIQDDGKVKWNKLHYPLGDIGNSSQDAPYAATLAALTVAASTATFNNINYDDILAVARPYADKKRFTFDWINEIVRMLKVPVDYSEDTHHDSLVRNSSLQMCLSILNHLGYKGMFQPRSFGGKFAMLALNARNVVILITIASNTPVNIREKLSPLDEHEVVDALAGCAKWSLDLLSWLTDSLFALLDDPQFLALLTPQRFSEMSTYLQSRADVSLHLLLCSSTRGFLSAVCRRILHLEILSNRAIEFYERRAAMQNATDPSSQGKSLHVVLYKAYQKMQRVTSSSLIKVQEFDRLLTVLNNDIRSAYQSSLASLASKNPPGAGGQKAMDAQIKNAQIHCELNMLLASSPPPAFLPVLLKFFNSDLKTYRAQADPSKLFFADFDLLEIDDDRRALAARKAKGRFIDVFKRVELAAPPARGTKEGDEAKLAQWRRCVRCSAVMEDVFGSRPGFTFVLAQQRKCSCGGHWGLLPKGALMI |
Length | 968 |
Position | Tail |
Organism | Colletotrichum tofieldiae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Glomerellales> Glomerellaceae> Colletotrichum>
Colletotrichum spaethianum species complex.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.223 |
Instability index | 43.31 |
Isoelectric point | 7.61 |
Molecular weight | 107234.91 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP07136
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.05| 28| 157| 673| 703| 1
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673- 703 (44.92/35.99) LFALLDDPQFLALLTPQRFSEMSTYlqsRAD
835- 862 (50.13/32.05) LLASSPPPAFLPVLLKFFNSDLKTY...RAQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 308.12| 100| 146| 99| 204| 2
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69- 115 (23.72/ 9.22) .......................................................ISPDGKtleaRFLRSH.P..DDGN..................WGlSeptkvDLITINASSPIvHLAWA
116- 225 (168.72/104.51) STASPELAVIdatgRVAI...LTYSITLNRPFATRKWDHDPSDDLHAIVGSyWLPLAPQAK....QYYVSHGPAVKDGNQYRY....ESSFVHAYGPWH.PnpsksALLCVTTNGHL.KMFWA
265- 348 (115.68/61.06) ATTSKQLRLV....RVGInwgLPQSQSDNKPPPGSQALNPTMQEKHVAISS.WLPSGS...........STTPIDSAANQLTHleilPSTLDHTGQGWA.P......................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.43| 23| 24| 905| 928| 5
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905- 928 (40.64/29.29) A..PPARGTKEGDEAKLAQWRRCvRC
930- 954 (38.79/23.25) AvmEDVFGSRPGFTFVLAQQRKC.SC
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