<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07134

Description Uncharacterized protein
SequenceLHNLFVFEQASILLEVGFSSFYPPDLDSIYNMDVIRLDRLWSDLLRLSPKPSNNVPAGHDPTIGPFDPLRQILDLFVEAIATLQNEGVTLRLLWSLDRGIERGYFTPLQVTNALLSRRELTVDNQVFFRNVFKFLLKLVFYLDYKNNRLVFIKTIDKSFQFTSDAPVRHFYNPAVELIQLLLCREINLLPAYFTMYELNKFRGDKSIRPNRLIESEVERFMADFDFPLRILYSYHELDMVPIAGITLEKHPCFRLDPAELTLSMLRQAILYPPAFKTRQLGLACNLLGQLRCTQLASSLLACNERQAVAYELVESLRYGGDDVLIILSIVEFFLFTKGPHMTLVGLAVSELIFSVMEITEEEKCTEWTARIFSHLAGLVICFVVDRVVRLNDIISKLNSKVGIRINSSFTAFFMMISDTLTDFVSCLHLFDQLFPEADELDNAAVERLEKLWVEDLGYWSTKRRPISLKTLEEMSLDGSDLRFILFSPDRLFGSWFPDGARSELCAKDGGEEFTDKNGASTVSDAVINGASYDEDVADDGDDTTSTSEDESVAEDSSLLLSKKSKTVLKRGERSGRRKDEDMTHLVAAAACAWEMILQMNNGGEEVGSGSGVGGVGGRAMKESHLPRTIPPLLYPLQAQIATWLEHLKESCVGGCAGGGSVVESGETPNDTQTPQVVQSLSWLEFIITLNTCKVNDPLPGIGGGLPLNNGPFMLPYGLSGAGRLTPLPHRLIRKMSIHLQMIFCNEMRQKLSEMTKPPCAEPGPAYLTSPATLETFSRFLSYQVEKNLIIPIREIYRRLLLESGSINIPIYYHPTDTDGTTRNDCYPPINDDFYALSFWFDLLGHRLVEALPVEHRLSYRDELFLRVDLESHELVYALDWTIVQFSRRVLTPDCILYNLQSSSLQQQFSQQQLPLHSHSREVTSRVILFSTLQAVCAYDLLEVGEVRCQTEEQLMRCQIREQFMTMRAETRAIFGEECGSFHLPAVIARLADLLPTTLAFAAPLQAPIFNAEVVNPPEAETYFSLRERLLFSVHDLYKSLLLESGDDCEVKWAELNLRNERSFCVILVALINGKMPLPLTLLNNLLQLPPATVNAQVKVLCEYLITAINKFEEFERQNLSLPVHIYAPCKVLTATIAFCVQYGIITMDRLLLYLFVRSNNSPIDVAAAHSIAIFLITQCPQLVEAIKTLESFVPNSSTIISSPRWPELLRRLHTILPEKQVIFLPSSTNGQTDASSFMVLRRRPCQPVYYDHLILRLIPILEIIFTSFLDNPPPLLQLARFCDTIAPLFRIRFSPYMLLAHPMSLCFLLLRGQFHHFSSGAATASGVVGGATQGATTPGGGQMQQLTWRNPTQVDEVACQLILRCILRAHQALAERANAHRECAQAFMSSTQKVCGLLSPPAWMTLNILHEAAMQAGGYNAVFSDTDIANCLRMAYGSDAEIRLASALHSATESVFPELESHLARLLQPVVKVMKKHGLCGVPSAWRDWRSEENVNPQAAGIYAVAVELMALHPPSDTSRVPQAAGCLMECLRKRSGSGDFHTWLNVTGALVSVLPFVFRHNILCLTCTLIHDPCFNDSEQWPSDLLTLKTCNGLSPHSPAQLLRVFRRRRALTDQPVRLTIFKGQKEAEETTMKACQQDDDEASWEVLGRPHTSSVRFFETILPPQLPQGSILPNHLFKAAVWHAIWSHANMNDNPTLLRIFDEFVLKYVNNEAKLLMAFSMITPPMKALSNDKSTIVDLTVSLYKAVQQVDEALAAKGIPLYHVNTIADLLYHIKYTYVGKAVQDEVQGLLSRMRPHLQNCLKFVFSTPTTTGCIKTNNCTDIKYPIFEDREYRAAARPPAGIVDEFF
Length1850
PositionTail
OrganismHydatigena taeniaeformis (Feline tapeworm) (Taenia taeniaeformis)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda> Eucestoda> Cyclophyllidea> Taeniidae> Hydatigera.
Aromaticity0.09
Grand average of hydropathy0.005
Instability index46.37
Isoelectric point5.73
Molecular weight208057.56
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07134
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     497.76|     217|     408|     770|    1044|       1
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  812-  931 (130.23/139.04)	.................................................................................................................................................................................................................................................................................................................YHPTDTDGTTRNDCYPPINDDfYALSFWFDLLGHRLVEALPVehrlSYRDelFLRVDLESHELVYALDwTIVQFSRRVLTPDCILYNLQSSS...LQQQFSQQQLPLHSHSREVTSRVILFST
  932- 1044 (118.83/70.61)	LQAVCAYDLLEVGEVRCQTeeqLMRCQIR.EQFMTMRAETRaifgEECGSFHLPAViARLADLL..PTTLAF....AAPLQAPIFNAEVVNPPEAE....TYFSLRE.RLLFSVHDLYKSLL..LES.............................................................................................................................................................................................................................................................................................................
 1223- 1337 (142.47/66.95)	...............................................................................................................................gddcevkwaelnlrnersfcvilvalingkmplpltllnnllqlppatvnaqvkvlceylitainkfeeferqnlslpvhiyapckvltatiafcvqygiitmdrlllylfvrsnnspidvaaahsiaiflitqcpqlveaiktlesfvpnsstiissprwpellrrlhtilpekqviFLPSSTNGQTDASSFMVLRRR.PCQPVYYDHLILRLIPILEI....IFTS..FLDNPPPLLQLARFCD.TIAPLFRIRFSPYMLLAHPMSLCfllLRGQFHHFSSGAATASGVVGGATQGATT
 1343- 1461 (106.23/44.69)	MQQLTWRNPTQVDEVACQL...ILRCILRaHQALAERANAH....RECAQAFMSST.QKVCGLLspPAWMTLnilhEAAMQAGGYNAVFSDTDIANclrmAYGSDAEiRLASALHSATESVFpeLES.............................................................................................................................................................................................................................................................................................................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.34|      33|     410|      18|      51|       2
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   18-   51 (58.18/38.79)	FSSFYpPDLDSIYNMDVIRLDRLW.SDLLRLSPK..P
  430-  465 (53.16/30.27)	FDQLF.PEADELDNAAVERLEKLWvEDLGYWSTKrrP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     245.41|      80|     371|     685|     782|       3
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  611-  715 (123.02/83.73)	GVGGVGgramKESHLP.RTIPPLLYPLQAQIATWL.EHLKESCVGGCAgggsvvESGetPNDTQTPQVVQSLS.WLefiitlntckvndPLPGIGGGLPLNNGPFMLP
  717-  809 (122.39/77.40)	GLSGAG....RLTPLPhRLIRKMSIHLQMIFCNEMrQKLSEMTKPPCA......EPG..PAYLTSPATLETFSrFL...syqveknliiPIREIYRRLLLESGSINIP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.94|      17|      99|     170|     189|       6
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  170-  189 (27.06/27.07)	FYNPAVELIQL.LLCreiNLL
  270-  287 (28.89/18.88)	LYPPAFKTRQLgLAC...NLL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.54|      26|     480|    1170|    1195|       7
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 1170- 1195 (43.56/20.91)	SIAIFLITQCPQLVEAIKTLESFVPN
 1199- 1218 (29.10/11.80)	......IISSPRWPELLRRLHTILPE
 1656- 1676 (38.89/17.97)	SVRFFETILPPQLPQG.....SILPN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07134 with Med23 domain of Kingdom Metazoa
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