<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07133

Description Uncharacterized protein
SequenceMSGEVQGIELLFRIPPSKLIELFPHLNKHFPGLFGFDSPERLFPLSIERDSSVRTLSMLFDGVLIPSSLLSYNCKYICCDINRFMGSTRSPWTGVFHPSVSDPPLLKEQHRQLEELLNAAFSYYVKSYYHSQDTVTSVYCLGRDVGILICALIKSPLVDIVYLIDVKVSCRHSHLFFCIYFLGFHTKQRLVGSAIYNLSVVYAIKLMKDEFSTTEIDDLCFSFYLRQNRTEEAKVSANINEAHVKNIGVLIEAHSQRLDGHLRTCEHLSRWAASNIRDVRRIRLLLMSLLDRSTADSSETDAQEEGRQFDVSSEVNDVEASIRKIKLALDNLDKSAIKSKKQMDNRSLLPYNLVLPLDQMDVQVEDGDSLRRVDWLVGRNEACRWLRRTNYRTEAIQLSLASCGRFMRNTTLVPLSSAMDLRNLAAPHMSFALIEPNSRNPILYVKVGDIMHCLISFGNLCMENIIVRGLDESHCAPGYTPRSRTANSGPFSRVSQAMSDLLCSRVISGFSANLLPNADNISDSVLPTASQLDLTTPSRHVTFVRVTEAARNALVHFATTTEPPTQLSALHQFCDWLQTYTRLFTEPCASCEQLLGQDAALPVLRTFHTNPANARAQHEQCRVNASPTAELFLLHIDVHKFYSSIMSSFAFVDESREQVRLGNGPYSGFIPQNRLKYIQSEHFSRLVSKQNSETELLEDMRYALKWFISQEFLHRSVWDIWKSFLREFNALALSHLKLAEVHHRLSLEFKPIKSLRVSVSKRIFEQLKSLQNDLAASMQEMVKSQKIYSEEEKQAHETRLKAMNIEDKLRRRSTNLFNSMAQLHRNHVKISQRRDECENRSAGARNEYLFQLTAINAHLDHYLKTDIPDLAQILDGDVYDRFREVLSKTSEMELDICRHHQDPFKTLLEESSKINRTTAWENFIKESPIFSVDVEFHFEPRDGDTISSLLSVNAKEGSFDQVAKKLARRFVTRERRIKSYRDEINDLCSGRISPSPGMSVSLSQQVPPPPRKFPLKDYDANEESGALNQEYVENKVEELEFAIRREEIEKTKISACLELLKKTHGRLSFLNLTLNTLCINAIIKCNNHQRKNHFKPCDEYRWDRKPSCAFLLLVDVQAALYEANLAAAEVEAATAGGGTTVAEKTHHGASSSSTAATGSSSTEGSTVGLTGLLTESGQHRSSALLEGSFVPLNSASRSRTQNGGVSRTSAQQLANEAWARVTLTPANVTTAGENYEPSFIQLDDEDPLSQQQSSRREPSPEVDWTGGGRLPKATAMYEFLAARSDEINMVCNEQVVLLGTGDGEDWVKVRSLLDGKEGLVPRAFLSIDPTPPPAPPHPSVPTLIAQSDTEQDPHDKTSSPPASSPSDLAASTHPPMSQRLAGQFVRALIDFAGTADDELSFGVGAVIHVLGRRAVGEVDDGWIEGELVPLTDAETSTPPPRGVFPSMLVEIVPAEESWKRRLGACRPRSAKALLSTGFPADTKTSPISERRCKLLSSSGSVPSPRSSNSGNRSKSRSASAKRSWSGGAGGGQRRSTVSHLVSSSQRSLHRHHQQQHHEHQGRETSAGHGRASHTLITTKVNPSQASPTSPPPPEANVPGSICQQHEFSSVTPNGEVKHEILKASEESLSVEAWSYVEDLFGKARVGRIRSNLHNQEEMKERGSMEYAPGQHAHI
Length1674
PositionTail
OrganismHydatigena taeniaeformis (Feline tapeworm) (Taenia taeniaeformis)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda> Eucestoda> Cyclophyllidea> Taeniidae> Hydatigera.
Aromaticity0.07
Grand average of hydropathy-0.413
Instability index55.74
Isoelectric point6.69
Molecular weight187086.05
Publications









Function






Annotated function


GO - Cellular Component
cytoplasm	GO:0005737	IEA:UniProtKB-KW
F-actin capping protein complex	GO:0008290	IEA:InterPro
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
actin binding	GO:0003779	IEA:UniProtKB-KW

GO - Biological Process
barbed-end actin filament capping	GO:0051016	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07133
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     437.39|     136|     147|    1304|    1445|       1
---------------------------------------------------------------------------
 1304- 1445 (225.33/132.22)	EDWvKVRslLDGKEGLVPRAFLSID.PTPPPAPP.HPSVPTLIAQSDTEQDPHDKTSSPPASSPSdlaASTHPPMSQRLAGQFVRALID.FAGTADDELSFGVGAVIHV.LGRRAV...GEVDDGWIEGELVPLTDAETSTPPPRGVFP
 1456- 1598 (212.05/111.19)	ESW.KRR..LGACRPRSAKALLSTGfPADTKTSPiSERRCKLLSSSGSVPSPRSSNSGNRSKSRS...ASAKRSWSGGAGGGQRRSTVShLVSSSQRSLHRHHQQQHHEhQGRETSaghGRASHTLITTKVNPSQASPTSPPPPEANVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.23|      27|     141|     817|     843|       2
---------------------------------------------------------------------------
  817-  843 (49.52/32.89)	FNSMA.QLHRNHV....KISQRRDECENRSAG
  959-  990 (37.71/23.24)	FDQVAkKLARRFVtrerRIKSYRDEINDLCSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.04|      34|     588|     267|     339|       4
---------------------------------------------------------------------------
  301-  334 (56.72/89.92)	DAQEEG...RQFDVSSEVNDVEASIR.......KIKLALDNLDK
 1019- 1062 (45.31/ 8.64)	DANEESgalNQEYVENKVEELEFAIRreeiektKISACLELLKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     187.29|      59|     656|     472|     593|       8
---------------------------------------------------------------------------
  472-  537 (95.06/147.29)	ESHCAP.GYTPRSRTANSGpFSRVS.QAMSDLLCSRVisgfsaNLLP.NADNISDSVLPTASQLDLTTP
 1186- 1247 (92.23/36.62)	EGSFVPlNSASRSRTQNGG.VSRTSaQQLANEAWARV......TLTPaNVTTAGENYEPSFIQLDDEDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     195.90|      56|     656|     203|     264|      10
---------------------------------------------------------------------------
  203-  259 (86.68/61.74)	AIKLMKDEFSTTEIDDLC....FSFY..LRQNRTEEAKVSANINEAHVKNIGVLIEaHSQRLD
  854-  915 (80.59/52.01)	AINAHLDHYLKTDIPDLAqildGDVYdrFREVLSKTSEMELDICRHHQDPFKTLLE.ESSKIN
  931-  956 (28.62/ 6.08)	SV.............DVE....FHFE..PRDGDTISSLLSVNAKE..................
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07133 with Med27 domain of Kingdom Metazoa
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