<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07129

Description Uncharacterized protein
SequenceLLTRRELTVDNQVFFRSVFKFLLKLVFYLDYKNNRLVFIKTIDKSFQFTSDTPSRHFYNPAVELIQVLLCREMNLLPAYFTMYELNKFRGDKSIRPNRLIEGEVERFMADFDFPLRILYSYHELEMVPIAGITLEKHPCFRLDPAELTLSMLRQAILYPPAFKTRQLGLACDLLGQLRCTQLASSLLSCNERQAMGPHMTLVGLAISELIFSVMEITEEEKCTDWTVRIFSHLAGLVICFVVDRVVRLNDIISKLNSKVLTDFVSCLHLFDQLFPEADELDNAAMQRLEKMWMENLDYCGAKRCPVAMKTLEEMSLEGSDLRFILFSPNRLFGSRLTDDTQSELNEKVGGGELTYKSGAAPSSNAVVNDADYYDEGAADDGDDTASTSDEESAPEDLGLHLPKRPMTVLKRRGRSGRSRDEDMTHLVAAAACAWEMILQMNNGGEEMGAGGGGGGRAVKECHLPRTIPPLLYPLQAQIATWLEHLKESCVGGCVGCGSAVEVGENLVDTQTPQVVQSLSWLEFIITLNTYSPNENLQITRSVVTSFWLPSNDPLPGIGGGLPLNNGPFTLPYGLGGAGRLNPLSHRLIRKMSIHLQMIFCNEMRQKLSEMTKLPCSETGPAYLTSPATLETFSRFLSYQVEKNLIIPIREIYRRLLLESGSINIPLYYHSTDTDGTTRNECHPPINDDFYALAFWFDLLGHRLIEALPVEHRLSYRDELFLRVDLESHELVYALDWTIVQFSRRILTPDCILYNLQSSSLQQQFSQQQLPLYSHSREVTSRVILFSTLQAVCAYDLLEAGEMRCQAEEQLMRCQIREQFITMRAETRAIFSEECGYLQLPAVIARLADLLPANSSFATPSQAPIFNAEVTNTPEAETHLSLRERLMLSVHELYNSLLLESGNDGEVKWTELNLRNESSFCVVIVALINGKTSLPLVLLNNILQLPPATVNAQVKVLCEYLVTAISKFEQLERQNLPLPTHIYAPCKMLSAVIAFCVQYGIITMDRLLLYLFVRSNYSPIDVAAAHSIAIFLITQCPQLVEAIKAVGNFAPNSSNILSSPRWPELLRRLHKILPEKQLILLPSPTSGQIGASPPTVLRRRPCQPVYYDHLVLRLIPVLEIVFTSFLDSPPPLLQLARFCDIVAPLFRLHCEASVTSIILELAVLSLLFYASNYLGGM
Length1176
PositionTail
OrganismTaenia asiatica (Asian tapeworm)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda> Eucestoda> Cyclophyllidea> Taeniidae> Taenia.
Aromaticity0.09
Grand average of hydropathy0.024
Instability index51.85
Isoelectric point5.47
Molecular weight132449.58
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07129
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     168.99|      39|      40|     445|     483|       1
---------------------------------------------------------------------------
  445-  483 (73.58/45.11)	EEMGAGGG.GGGRAVKECHLPRTIPPLLYPLQAQIATWLE
  486-  522 (58.43/34.28)	KESCVGGCvGCGSAVE...VGENLVDTQTPQVVQSLSWLE
  675-  697 (36.98/18.95)	...........GTTRNECHPP..INDDFYAL....AFWFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.77|      16|      30|    1050|    1067|       2
---------------------------------------------------------------------------
 1050- 1067 (25.65/21.15)	PNSSNILSSPrwPELLRR
 1083- 1098 (31.12/17.22)	PTSGQIGASP..PTVLRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     231.93|      79|     229|     569|     657|       3
---------------------------------------------------------------------------
  569-  657 (120.28/102.96)	TL....PYGLGGAGRLNPLSHRLIRKMSIHLQMIfcnEMRQKLSEMTKLPCsetgpAYLTSPATLETFSRFL.............................SyqVEKNLIIPIREIYRRLLL
  787-  898 (111.65/70.47)	TLqavcAYDLLEAGEMRCQAEEQLMRCQIREQFI...TMRAETRAIFSEEC.....GYLQLPAVIARLADLLpanssfatpsqapifnaevtntpeaethlS..LRERLMLSVHELYNSLLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.51|      13|      30|     944|     956|       4
---------------------------------------------------------------------------
  944-  956 (22.71/14.90)	LP.PATVNAQVKVL
  975-  988 (22.80/15.01)	LPlPTHIYAPCKML
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.22|      10|      30|     698|     707|       9
---------------------------------------------------------------------------
  698-  707 (17.04/ 9.08)	LLGHRLIEAL
  725-  734 (17.18/ 9.22)	LESHELVYAL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07129 with Med23 domain of Kingdom Metazoa
Unable to open file!