<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07119

Description Uncharacterized protein
SequenceMGFSDSSQTQSNLKERLKKLDELEARVMEIMQSAGATLDELSKDMPSQKQIESLQAQSPVHLPRVTKCTPDSGVKMEPVESDPAVTSTVGEIDIPDSETSGEKTEVANITRPPFWRFSQTKVEKVIRSSDSEAPETTTHEFEVPEFEFDDEHLDLQGDLDDAFLDIEDNDDLIHGRITPDGFIDEDFEHELGWSEKELCIQDVIDADFRDISRLGILQVGGNDLDGRKVIAFFACRLPPSDLIDHDRLLQYVTKTLEQYVSSFYTLVYFHWGLTSQNKPAFPWLVRAYQTFGRSFKKNLKSLVVVYPTRTVRVLWSLFAAFVSVKMNKKLHYVNNLRELESYVPVRQLNLPLRIRDYDNRIRPFGAPLRMDPAAASIIGGHDADDAPLCEHQQFGTTLQHIKAINGGRKIPVVVEDTITYLRGYGLNTHGLFIKPTNATTLRDVQTMYNQGEYVDLCEFDDPHLAAHLLKSFLQELKEPILTYDLYDDVLKSCSRMSRNRVNAIRHLLTVLLPRDNYDILFYIFKFLTEILEHSSKNMMTAANLSVALAPSLIWSRHQIVIPSSTTQGLIVSFTQLCITHFESIFTRA
Length588
PositionHead
OrganismMesocestoides corti
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda> Eucestoda> Cyclophyllidea> Mesocestoididae> Mesocestoides.
Aromaticity0.09
Grand average of hydropathy-0.290
Instability index47.99
Isoelectric point5.21
Molecular weight66971.22
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process
signal transduction	GO:0007165	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07119
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.83|      18|      18|     336|     353|       2
---------------------------------------------------------------------------
  299-  316 (23.79/11.36)	LKSLVVVYPTRTVRVLWS
  336-  353 (27.91/14.33)	LRELESYVPVRQLNLPLR
  354-  369 (24.13/11.61)	IRDYDN..RIRPFGAPLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      68.12|      15|      18|      89|     103|       3
---------------------------------------------------------------------------
   89-  103 (25.38/14.55)	VGEIDIPD....SETSGEK
  106-  124 (18.51/ 8.75)	VANITRPPfwrfSQTKVEK
  138-  152 (24.24/13.59)	THEFEVPE....FEFDDEH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.73|      15|      16|     223|     237|       4
---------------------------------------------------------------------------
  223-  237 (25.89/16.79)	DL.DGRKVIAFFACRL
  241-  256 (20.84/12.19)	DLiDHDRLLQYVTKTL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07119 with Med11 domain of Kingdom Metazoa
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