<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07112

Description Uncharacterized protein
SequenceMSKFPSSERSPLKGRSSGPPDVYPQKPNQLEDALTEQLVKDGYKYHRPVNDEYKLGTSFFAPSDLETAWDLFCNTLVVKDRMAPAYEPDNSHIPVRSLSGNDAIWKQITGWLSDLSGANCNRRSTIFHTNKDRILNDLVTNRFPLSHALRLINKLIIHTTAPLENLKKKQKLDPTMEWTEEILQLLDKLFDGDLSNSFMNKYDSMCKNWDYLFGLLTVLYDNDLIEHWDVLKSLASKLEHMYQHALRYIPQDTSLCSTDRPQPGRFDPFRSLKFVLPYFQRFCQRFTESELITRRVIYWACSVFTEQYRSCTLRSNRSSAPVFCKPEDYADFFVCSHHRPILLATSSMIIALTLECPSAAVWNRITLETGFRYLVGSPLDLLPCSLACLPIIPGPEATNLRRCLLETETALLERSRLAEAGWCLFPSRTITSNECTDETNASSLFFCFSSLILYLVYFFNISFFSYNFLQAEMFVRVLNELDSQDFNVCPEVDMIASLFRKFFPQELLDSPRSLTTLVTFLCKWAVSSTRTGLHRSIIVACLLDHLHSKLPYFTFQTCLLTFLDVHAPPSPNADPPGFRSLVCLFAELIDRGLFNHDAFVRTCIARGIFDSSFHPLANANNLPVPACSVNTLLSASSLNNNFSVQSEISEDNDRISVDNPDSVRSDLGGNPASAVLPQRNSCDLNHHLQFLINFPLPQDDSYAHEQNQRAQLLYGSSARAHSRARELPRKISRAIVKLFTKSAHRLDVVHGELGKRKKKDRGDPGSTPNGGIVGGGGQRGGTSKESRSLDELLDGISTRFRSLNYYDMECVISKSMPAYLGSLNGSSTTSNVDTESSPTREHIYFPALKSVFLFFDLVENSLNIICLLETVVDTIDSLLISSQSIPYPCMTSYLSQVWIRAIGILRAYQAVLMTMPNLQQRIFNCLLEQLRNKTMEKAQIKRCIIEYLRNLCHSSAYINRLTWPTLENQLQLSLSSCRIASDKCKQLVSNALRNLMICDQEGSASFVESVLDYSAQCPELAMEWLPAIAAVVNPAAHGGGLSLSGASLTSPSLSQNSNSDLLSIGLGDDLTTWDNLTLLVGNLFASHCIDSDKLLDTLINPCLALGLDQNASPIDSLSETTVRIACHMLHRFFTLDITKLTTFEACSPSLRVPESAILYSVIRRINYAPFIDTLKMLMILSNKGKALELIEDAGEDGSAAGSDDNSSDNDRDSERETDDGHGDSSLDMADGYDLADGPTKNKRKRRRVYLGPAKSKRRKGPNSSRRGGSSGILLNCRRRNRLASNIHPCTCAFLTSGQPPSDAEVKEMPLRDFAHLVLREICVTPWVREHFYRISAHLLQENVLIDKMISSNQTRFLLHIIYHPHDVKWLDLAACTDNIADAILQLISGVNIWSLHSTRMELNLLCKQISVTSSKEALDQVATRIVNGFNEHALTYLKPALSTSSFGEQLPEALPDIEVPESDNTWLLPSLVANLPNELKTHIVTKTCDILKGIKSFWRHKNDEDQERIVMQHSILLAHPVFSSILHVCMETVDPLDRLYEQLEYFVSGVKETRDRMPENLRTRHILQECLALRLSLLGICLSSANLSTDRLIGGALILAQLIGYGVTEPHSNQTLFYACLDMLHTLAHNFAAQIGPDNQQYQNLAKKVRKKLAERHFTEGIEFIRPLLFIGRTGYPFVAVTPLAGTAGAGNRGDSIGGTGKPGGSSKFASFKSSGKSSGMSASRVSNNQGSSGSISSSGPGGNNNGTPMSGGGGVKAFTRKRGYAFKSRDRFAPWEIYDVNRRPAFLAMCGAVQVPSAPSRYEDQANILLSHEHPISHRRSNEFYHTSLFPEVETPVSSSNQTATAATPSPSTSSSSIDSASKQFTLGPVPPGKRHAGGGPDAGGPTLMSAQRRMQAQQNQQQPPAAGGRMPKPEDMLYARQQQQQQMRMQAPSQQLSTKRKRSRAQLQQDEMQLFTQMYTPQTQTSSAMAAAQAVESAAAVSVTTPQGKRKRIAGAGMVGVNSGQVASAMRRSYENGPLPTNPSSQQAWSSGRVPPVSSGGSGGRMMPNQRQNLPEFVQNRTKAQQQAAQAKAAQMAAAYATGGGGGGGGMSNIEEHYSQPQVSQPSQQTDPRFRGSGSDPNYGFSEMLPPHSGNSGPFVPTSLPDFPSSMDPQMRLRRQQQQRYNQSQVVPDPPPYPGRPNQQQQPNPQTKATAGPPSQMIQMQGQSAGQHRTPTYSQFMGNNEAAPRGVASGSQLPHFSRPLYDSSGGNEYR
Length2256
PositionKinase
OrganismHymenolepis diminuta (Rat tapeworm)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Platyhelminthes> Cestoda> Eucestoda> Cyclophyllidea> Hymenolepididae> Hymenolepis.
Aromaticity0.08
Grand average of hydropathy-0.355
Instability index57.44
Isoelectric point8.17
Molecular weight249824.23
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07112
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      82.48|      19|      21|    1911|    1931|       1
---------------------------------------------------------------------------
 1913- 1931 (36.02/15.90)	PKPEDMLYARQQQQQQMRM
 2174- 2188 (23.38/ 9.19)	PDPPP..YPGRPNQQQQ..
 2199- 2216 (23.07/11.81)	.PPSQMIQMQGQSAGQHRT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     566.60|     182|     260|    1700|    1904|       2
---------------------------------------------------------------------------
 1700- 1904 (280.40/202.40)	TGKPGGSSKFASFKSSGKSSGMSasrVSNNQGSSGSISSSGPGGNNNG...TPM..SGGGGVKAFTRKRGYAFKSrDRFAP.......WEIYDVNRR..PAFLAMCGAVQVPSAPSRYEDQANILLSHEHPISHRRSNEFYHTSLfPEVETPVSSSNQTATAATPSPSTSSSSIdsaskqftlgpVPPgkrHAG.GGP.......DAggPTLMSAQRRMQAQqnQQQ
 1962- 2165 (286.20/158.39)	TPQTQTSSAMAAAQAVESAAAVS...VTTPQGKRKRIAGAGMVGVNSGqvaSAMrrSYENGPLPTNPSSQQAWSS.GRVPPvssggsgGRMMPNQRQnlPEFVQNRTKAQQQAAQAKAAQMAAAYATGGGGGGGGMSNIEEHYSQ.PQVSQPSQQTDPRFRGSGSDPNYGFSEM...........LPP...HSGnSGPfvptslpDF..PSSMDPQMRLRRQ..QQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.26|      23|      79|    1089|    1111|       4
---------------------------------------------------------------------------
 1089- 1111 (40.09/29.20)	IDSDKLLDTLINPCLALGLDQNA
 1171- 1193 (38.17/27.40)	IDTLKMLMILSNKGKALELIEDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.80|      19|      23|    1560|    1579|       5
---------------------------------------------------------------------------
 1560- 1579 (27.88/20.32)	NLRTRHILQECLALrLSLLG
 1586- 1604 (30.92/17.68)	NLSTDRLIGGALIL.AQLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.39|      16|      76|     190|     220|       7
---------------------------------------------------------------------------
  190-  206 (28.70/46.43)	FDGdLSNSF..MNKYDSMC
  793-  810 (27.69/ 7.13)	LDG.ISTRFrsLNYYDMEC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.79|      13|      23|     551|     563|       9
---------------------------------------------------------------------------
  551-  563 (25.63/16.44)	PYFTFQTCLLTFL
  576-  588 (24.16/15.00)	PGFRSLVCLFAEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.55|      27|      32|     381|     412|      13
---------------------------------------------------------------------------
  383-  412 (40.27/36.51)	PCSLA....CLpiIPGPEATNlRRCLLETETALL
  414-  444 (42.28/20.56)	RSRLAeagwCL..FPSRTITS.NECTDETNASSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.89|      11|      24|    2217|    2227|      14
---------------------------------------------------------------------------
 2217- 2227 (22.68/12.66)	PTYSQFM....GNNE
 2240- 2254 (17.21/ 7.64)	PHFSRPLydssGGNE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.49|      13|     260|    1351|    1363|      16
---------------------------------------------------------------------------
 1351- 1363 (25.99/16.65)	SNQTRF.....LLHIIYH
 1612- 1629 (19.51/10.57)	SNQTLFyacldMLHTLAH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.57|      11|      79|    1431|    1442|      24
---------------------------------------------------------------------------
 1431- 1441 (19.68/14.27)	EHALTYLKPAL
 1461- 1471 (20.88/ 8.88)	ESDNTWLLPSL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07112 with Med12 domain of Kingdom Metazoa
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