<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07096

Description "BMA-ATF-2, isoform c"
SequenceMDGLDIESCSSSHSSSSLRGLNLICSTNHIDRRPSDSSNSSETSISPAPSNINSNRRRTSIHESIRDDMFWEKRRHNNDITKKSRERRRMNDMIMEQKLLELTKENNLLRSRLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQTLRLVTSAAHDTVIVSTAQRKNNIDVMIPTVPSLPVSSVTTLAANLANVIGPPSKLPAMFPTHLFTATPLLTTSSGSVPSPIFPSSATAPTSLLTPAGASATSQVSASAAQQLPALQICTLQAALQQVQQNYCSSSGPTTISSGHGAFQPFHSSRDPTSSTQSYSPDSSTADIAPLDYSMHGTTHKETSSDSSSHILRYELLERQPDLSTETETEQQISNDTLAQSSSSSDKARESDTDDKPRSLLGSLLSTKRTSPLVAQSRTDTHSGLNNSSPKDNDLKNCLSSLAVNLSNALTVPGTRTVISDVSSKPDTVYSGKTIKSDSSDSMESPTSNNSTTDSMRSQLSPAPKHSAIVKALRSRPSSKQQYIDRRRRNNEAAKRCRANRRAQFEYRSKRAQQLEAENDELRREMNRLNQELEQLKALHAAKNANIL
Length591
PositionKinase
OrganismBrugia malayi (Filarial nematode worm)
KingdomMetazoa
Lineage
Aromaticity0.03
Grand average of hydropathy-0.923
Instability index83.66
Isoelectric point9.20
Molecular weight65386.26
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07096
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.83|      15|      15|     115|     129|       1
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  115-  129 (34.60/13.80)	QQQQQQQQQQQQQQQ
  131-  145 (34.60/13.80)	QQQQQQQQQQQQQQQ
  146-  158 (24.63/ 8.28)	QQQQQQQQQQEQQ..
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.51|      16|      20|     215|     230|       2
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  215-  230 (31.00/17.81)	PA.MFPTHLFTATPLLT
  237-  253 (24.50/12.66)	PSpIFPSSATAPTSLLT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      81.72|      20|      20|     515|     534|       3
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  515-  534 (33.66/22.38)	ALRSRPSSKQQYIDRRRRNN
  537-  556 (32.07/20.95)	AKRCRANRRAQFEYRSKRAQ
  557-  570 (15.99/ 6.50)	QLEAENDEL.....RREMN.
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.65|      14|      20|     280|     297|       4
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  280-  297 (21.07/18.75)	QAALQQvqqnYCSSSGPT
  303-  316 (28.57/14.81)	HGAFQP....FHSSRDPT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      73.59|      17|      20|     450|     466|       5
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  450-  466 (27.91/15.19)	SNALTVPGTRTVISDVS
  467-  483 (28.32/15.53)	SKPDTVYSGKTIKSDSS
  491-  504 (17.36/ 6.69)	SNNSTTDSMRSQLS...
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.15|      15|      20|     173|     191|       6
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  173-  187 (26.27/25.60)	VS..TAQRKNNIDVMIP
  194-  210 (19.87/ 6.49)	VSsvTTLAANLANVIGP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.28|      19|      23|     325|     346|       7
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  325-  346 (26.22/29.89)	DSStADIapLDYSMHG.....TTHKET
  349-  372 (27.05/17.03)	DSS.SHI..LRYELLErqpdlSTETET
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.01|      10|      15|       3|      13|       8
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    3-   13 (15.14/12.83)	GLDIeSCSSSH
   20-   29 (19.87/11.62)	GLNL.ICSTNH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.20|      19|      21|      56|      74|       9
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   56-   74 (34.89/26.24)	RRRTSIHESIRD.....DMFWEKR
   75-   98 (27.31/18.94)	RHNNDITKKSRErrrmnDMIMEQK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07096 with Med12 domain of Kingdom Metazoa
Unable to open file!