<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07091

Description Uncharacterized protein
SequenceMEKEDIMERQEQKPVMNSAQCDKYSAVDLSLEEVEEEIRLEKIRQTSLKFSWDYLSQLLRRNLMEKRFVLSADDKEDLMQAAADMRKYMPSDSDRDLSTHLRHLAESLSSDFQAHPGYYKIRNADFSLEITVSLDGQQITSCSVSWFGERAVEAQALRLYVSRNRWDLIHTALTAMFHLVPSDLSRDEKIYCLRSLEYAEKDLLNMSGSAPSIFEQINGGILGLCKPRTESTPFTIYPFVEPVIFLDAASGGIISPTDEQVLYDVEPYLQLCVVSSSTPNFFSDTTLFAHGEWRNAVSGRQLPAAFCLRFSRPIIFSSAAIKKLSKIASVQLNVEGSYNLYQYLLNENEECHDLFVRLPGCSTQHYIFDDSMKSSQEDGILRQIPFAHLQDVVFLVSIIRTQLAHNAFFESLVRAHSRSACVDENVVDIHIASSYIDCFDLQFYLKKNFFIARVAVSPSNINVSLECVINGAVLPESQHATAILAKSWSLAVMMRSVLRRGGAISLAALEKPFVMSENVDNNCDVKISQSWLFVPNITDNSINYNKTEHEYVVDERISLNCSCDSNALGRQSPLSLLALFKELEKIEELIPPQKPMNGAQQCTAPPRNEMLAPRTSRIHSENTMTINAFSVLDAICDMAASIDDGESNVSEHSSHSSIVERCSPSTNENQRLRPQIPPQSPSPASERYRASQAGNFSQLSPLDIARQRLAQQAPMSNPTDIFEFDDPPRMNSAGSMGTPAQQFHFPEAGQSPYPFAAVQSTRGPLSAQPTLKRRGRGRKAGNVGDRMLDPARPILDQNTGLMFRGMNIPTRKPRGTSTARRPRRPRKAAHMPASPAHSHQFALNRPMLQRSFSEMPVYPSQMPPVSLSQENRSEASEFDGTEESSDDETDPPPPVCTTAIPQPSSQLTVSSSATVPQTTVVGNLSSSSATLPMVNKCSSLTTASCLPSIPSSAPAAELTPPTSSSPTSTSNSSMQSAALLAHKARKGSLEAVVGKLHCKTAPASSSSSTTSNPYLASDLYDDESEPVSKPPEPVPAKRDSPSLSTSSPGARMSPNLAKMNAEQPGYGSELKIMIKLKQQASTRPSTGPSQSSSGGVPPSMRLVGQPPSSSRSKEEKALLRQKQLKEKNRSAPDERARKAGKRERKGELSSSSSKKLKLDRPLSEQKTATISPKVEFPQALAFASLKNFKIPKVMENEKCESPTPTTTTTPAVATPSSSGAHLNVGQSLSSSTMQVVSSTSLSAATTATTVTATSSSSSAGTSSIFPPKPKSILKSPAEPPPSLFRGMGGMPPMLPGRRPLLPDPRNVMHHPPRPLVALPRMIPSVLSGANFMPPPSSSGRWMALAPQRQPSPRSSPSEQSAPSSGLSETATAMSKMQDSPTEALKIVADEE
Length1391
PositionMiddle
OrganismBrugia malayi (Filarial nematode worm)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.434
Instability index66.71
Isoelectric point7.75
Molecular weight151874.06
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07091
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     576.25|      79|      84|     678|     756|       1
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  678-  752 (122.86/46.81)	...............................PQS..P....SPA.SERYRASQA...GNFSQLSPLDIARQRL.AQQA.....P.......MSNP...TDIFEFDD.......PPR.MNSAGSMGT....PA...........QQFHFPEAGQS.P
  753-  838 (76.38/26.30)	YPFA....................avqstrgPLS..A....QPTlKRRGRGRKA...GNVGD.RMLDPARPIL.DQNTglmfrG.......MNIP...T......R.......KPRgTSTARRPRR....PR...........KAAHMPASPAH.S
  839-  916 (71.29/24.06)	HQFA..........lnrpmlqrsfsempvypSQM..P.....PV.S....LSQE....NRSEASEFDGTEESS.DD..........................ETDP.......PPP.VCTT.AIPQ....PS...........SQLTVSSSATV.P
  917-  960 (35.60/ 8.31)	QT....................................................tvvGNLSSSS......ATL..........P.......M.........................VNKCSSLTTasclPS...........IPSSAPAAELT.P
  961- 1039 (43.62/11.85)	.PTS............................SS..P....TST.SNSSMQSAA.llAHKARKGSLEAVVGKLhCKTA.....PassssstTSNPylaSDL..YDDesepvskPPE........PV....PA...........KR..........D
 1040- 1132 (74.76/25.59)	SPSL..........................sTSS..PgarmSPN.LAKMNAEQP...GYGSELKIM.IKLKQQ.ASTR.....P.......STGP...SQSSSGGV.......PPS.MRLVGQ..P....PSssrskeekallRQKQLKEKNRSaP
 1133- 1228 (64.16/20.91)	DERArkagkrerkgelssssskklkldrplsEQK..T....ATI.SPKVEFPQA...LAFASLKNFKIPK..V.MENE.....K.......CESP...T...............PT.TTTTPAVAT....PS...........SSGAHLNVGQS.L
 1265- 1340 (87.59/31.25)	FPPK...........................PKSilK....SPA.EP..PPSLF...RGMGGMPPMLPGRRPL..................LPDP...RNVMH..H.......PPR.PLVALPRMI....PS.......vlsgANFMPPPSSSG.R
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     174.76|      57|      90|      46|     106|       2
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   46-  106 (87.30/79.20)	TSLKFSWdYLSQLLRRNLMekRFVLSaDDKEDLMQAA.ADMRKYMPSDSDRDLSTH.LRHL..AE
  140-  200 (87.45/62.76)	TSCSVSW.FGERAVEAQAL..RLYVS.RNRWDLIHTAlTAMFHLVPSDLSRDEKIYcLRSLeyAE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.26|      17|      94|     419|     436|       5
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  419-  436 (26.18/23.95)	SACVDENvVDIHIASSYI
  516-  532 (32.08/23.93)	SENVDNN.CDVKISQSWL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.97|      19|     587|       1|      21|       6
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    1-   21 (31.10/23.98)	MEK.EDIMerQEQKPVMNSAQC
  583-  602 (31.87/17.90)	LEKiEELI..PPQKPMNGAQQC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07091 with Med1 domain of Kingdom Metazoa
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