<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07086

Description Uncharacterized protein
SequenceMTDECCYVCNECPNSYATLDDLERHMEQMHAGIFRSDTVTTNGTATLRLSKSEIDEDDGQYCLKNGTDEQKMDTMEHDGESGGNSPSSSDLSNFDGTMDSINYNLDESTNAEGCKTFGCRFCPKLFHERSQLNIHYKHTHRDKPQYECDECHVIFAIKRELSTHMRIHSGEQPHTCTQCGKQFGTRQLLKKHWMWHTGERSHVCPHCGKAFFQKGHLTQHLMIHAGGRPHQCPLCQKTFIFKFDLNRHMKIHAERGFSCDKCGRSFLKQMQLDEHMLKCKGATGVRSQPITRTSTPMTDTVNGIGNNGIVMKSESRTSTQSSPGHRRQSISVQQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQRQQHNQHHHQHQEQQQQQQQQQQQQQQQQQRHQQQQQRQAAGNAAVVVPPIFSAEEMSKVAQVLAVQQQQRALAAAAAAHHGAAAHAVVGNPLLQASALQNFAQNLLANGVNNQQPTGQTFFCIFCMKHFNTQASFTLHLSFVHFRNNIVNVSMQNCFQEHFDKEGKMNASLTSLPSIFGTVTNAKGISEDAITHSDTTTNSSCSSSPQKISPNVMQGRMQSPAQLFETDHLSDDLESSDISIQKGCEQCETHRQRVAELEQTLEAKRIELKNTRELMRRIGVIAGSLLESCTDFDKQWVTHSRKVYSQIQSVICNME
Length686
PositionTail
OrganismBrugia pahangi (Filarial nematode worm)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Spiruromorpha> Filarioidea> Onchocercidae> Brugia.
Aromaticity0.06
Grand average of hydropathy-0.884
Instability index57.45
Isoelectric point7.41
Molecular weight78037.12
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07086
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     100.24|      15|      15|     333|     347|       1
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  339-  354 (30.78/ 7.33)	QQQQQQQQQqQQQQQQ
  355-  369 (34.40/ 8.87)	QQQQQQQQQ.QQQRQR
  387-  401 (35.05/ 9.14)	QQQQQQQQQ.QQQRHQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     156.96|      20|      26|     164|     183|       2
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  137-  165 (23.66/ 7.67)	KhTHRDKPQYECDECHVIFaikrelstHM
  166-  193 (33.40/13.52)	R.IHSGEQPHTCTQCGKQFgtrqllkkHW
  194-  221 (34.55/14.22)	M.WHTGERSHVCPHCGKAFfqkghltqHL
  222-  249 (34.86/14.40)	M.IHAGGRPHQCPLCQKTFifkfdlnrHM
  250-  276 (30.49/11.77)	K.IHA.ERGFSCDKCGRSFlkqmqldeHM
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.90|      18|      31|     528|     557|       3
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  524-  543 (28.08/14.39)	NCFQE....HFDkeGKMNASLTSL
  554-  575 (24.81/27.13)	KGISEdaitHSD..TTTNSSCSSS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.40|      12|      32|     402|     413|       4
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  402-  413 (22.49/11.66)	QQQQRQAAGNAA
  435-  446 (20.91/10.31)	QQQQRALAAAAA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     108.31|      19|      47|     320|     338|       5
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  280-  298 (27.41/12.41)	KGATGVRSQPITRTSTPM..T
  299-  319 (20.69/ 7.37)	DTVNGIGNNGIVMKSESRtsT
  320-  338 (30.58/14.79)	QSSPGHRRQSISVQQQRQ..Q
  370-  386 (29.63/14.08)	QQHNQHHHQ..HQEQQQQ..Q
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     152.01|      43|     371|      77|     135|       7
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   89-  135 (71.35/67.15)	SDLSNFDGTMDSINYNLDESTnaeGcKTFGCRFCPKLFHERSQLNIH
  465-  507 (80.66/40.08)	SALQNFAQNLLANGVNNQQPT...G.QTFFCIFCMKHFNTQASFTLH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.08|      27|      27|     585|     611|       8
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  585-  611 (44.47/26.04)	QGRMQSPAQLFETDHLSDDLESSDISI
  613-  639 (44.61/26.15)	KGCEQCETHRQRVAELEQTLEAKRIEL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07086 with Med15 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EDAITHSDTTTNSSCSSSPQKISPNVMQGRM
2) LKCKGATGVRSQPITRTSTPMTDTVNGIGNNGIVMKSESRTSTQSSPGHRRQSISVQQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQRQQHNQHHHQHQEQQQQQQQQQQQQQQQQQRHQQQQQRQAAGNAAVVVPPI
558
277
588
419










Molecular Recognition Features






MoRF SequenceStartStop




NANANA