<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP07070

Description Uncharacterized protein
SequenceMILANKIRRINTQTNIQLTVKPLSLARINTFSVSLYFLHPLNLLPLFLIFHFFSLYVTWASSSSTNPIALFLAQEFLSLKKQNLQFYFTVDNLSGENIKPANWAVTDAYLNYMKRPVEDLAWNPELDYYFKLISRVVDTFQGKSPFPHVDWRFNEFANAGVHALHITCIELMALPVAANVVANNLIDLVVVGHKYIPRNTIEFWNNAIGVVLTALPEAYWSVINDRIISMMESPLLTYSPHFEPFQMINFMLSEHVKLWKLLSSCTLSSRLLIKIALSYVLWTLVYIDLTH
Length291
PositionTail
OrganismTetranychus urticae (Two-spotted spider mite)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Chelicerata> Arachnida> Acari> Acariformes> Trombidiformes> Prostigmata> Eleutherengona> Raphignathae> Tetranychoidea> Tetranychidae> Tetranychus.
Aromaticity0.13
Grand average of hydropathy0.321
Instability index39.55
Isoelectric point7.81
Molecular weight33547.80
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP07070
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.67|      14|      17|      21|      36|       1
---------------------------------------------------------------------------
   21-   36 (20.04/17.84)	KPLSLarINTFSV....SLY
   39-   56 (18.63/ 9.41)	HPLNL..LPLFLIfhffSLY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.41|      12|      17|     107|     118|       2
---------------------------------------------------------------------------
  107-  118 (22.23/12.17)	DAYLNYMKRPVE
  127-  138 (21.18/11.33)	DYYFKLISRVVD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP07070 with Med23 domain of Kingdom Metazoa
Unable to open file!