<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06988
Description |
Mediator of RNA polymerase II transcription subunit 31 |
Sequence | MASKNECENSTDNSPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATPALPAPASTPAQAPVSALPPVPATSVAVTATPTQAPSPMPYGLPKNDMRNPTIDNRRKRK |
Length | 201 |
Position | Middle |
Organism | Cajanus cajan (Pigeon pea) (Cajanus indicus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
|
Aromaticity | 0.12 |
Grand average of hydropathy | -0.720 |
Instability index | 66.05 |
Isoelectric point | 9.30 |
Molecular weight | 23277.23 |
Publications | PubMed=22057054
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364129
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06988
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.03| 17| 19| 138| 155| 1
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139- 155 (33.17/16.56) SATPALPAPA....STPAQAP
157- 177 (27.86/ 8.74) SALPPVPATSvavtATPTQAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.73| 15| 18| 56| 73| 2
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56- 73 (25.82/22.34) YFEdeaFIGY...LKYLQYWQ
77- 94 (21.91/11.45) YIK...FIMYphcLYFLELLQ
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