<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06982

Description Uncharacterized protein
SequenceMAVPAQTSEANAWDAILRQTKVAVEANTDPNAWASEVTSTLRSAAISLPSVQLAHCLVSHFFWDNHSAAAWKLLHTATSLNLLPRSLLIALLSFTVVPSRQVYPIAYRLYMELLKELGLMLEQDISSPNYEKIMKSIDDVLQLSQVYSQKLWEPGVVLVEFVFSIVWQLLEASLDDEGLLDHTTENKPRWIIRSDYMNIDGSLDDKKKTEHTEGFQKKNTAMAIEIIAEFFQHKMTSRILSLVHRNMSSHWGSFIHQMQLLVSNSSVFRNLKHITAKTLLLLTQNIHEVVPHEFKTKSKRETNVVIPACSQMSFASQSYGDSWSSLWLPIDLILEDASDGGQVAAFSAVEIITGLVKTLHAVNGTTWHNTFLGLWVAALRLVQRERDSRKGPMSRLDTCMCMLLGITTLVVTHIIEEEEGQLIEEAEHSPTNQGKDQQALGKCRGELITSLQLLGDYESLLTPPQSVIVEANQAAARAIMFLSGNPVGSGYFEYMSTNDMPMKFSGNLRHLIVEACIARNLLDTSAYYWPGYVNACNNHIPWSISNHVSGWSSLMEGSQLTPALVNVLVATPASRYFSFVIQKGSAVHEASVTGGFEEAEIEKIYEIATNGSDEEKISAATILCGASLVRGWSVQEHTVLFITKLLSPLVPPTFSGVESHLISQAPFLNVLLIGISSIDRVHIFSLYGLVRSVFNTCSLTDVELVNAACTFFADILYFCHLPQVPLLAAGLMIICEVFGSCVPDASWTLATGEKLTHWEVFSNAFTLLLRFWRFDHLPAERDATSSPFGSLFSPDCLLLVRNCKLASYGRMAKNRQRLKRWSKILSLSVEPVFMDSFPKLNFWYRKHKECIASIRPGLVPGEPVHLLVDSLLSMMFRKVCNGAEPLTPTTSGSSSSSGLALDDALMKLKVPAWDILEAIPFVLDAALTSCAHGRLSTRELATGLKDLADFLPASLVTIASYFSAEVTRGIWKPAFMNGTDWPSPAANLSLVEEQIKKMLAATGVDVPSLAVDGNSPATLPLPLAAFVSLTITYKLDKAAERFLALIAPAMSALASGCPWPSLPIVTSLWIQKVKRWSNYFVLSASRNVFHQNRDAVVQLLKSCFTSTLGLGSGCIYNNGGVSALLGHGLFSQISDGISPVAPGVLYLRVYRSIGDITLLIEEIVPILMLSVTDIATSDLAKGGVKKPKKTKFGINHGQVSLARSMARVQHAALLGASLVWISGGPKLVQYLISEILPSWFLSATMLEQDGGESRVMVAMLKGYALAFFVFLSAAFAWGIDNSLSPKRRAKVVGLHLEFLARSLNRNISLRCQCHCVASKAYISGLVSLMVSRAPSWVQEVDVNLLKRLSWGLRQIDEHELALRLLEIGGIGVMGAAAEMIIGFQYIY
Length1387
PositionTail
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.09
Grand average of hydropathy0.204
Instability index43.78
Isoelectric point6.56
Molecular weight152618.00
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06982
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.98|      12|      95|    1227|    1239|       1
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 1227- 1239 (19.00/14.34)	LVQYLISEIlPSW
 1325- 1336 (22.97/12.62)	LVSLMVSRA.PSW
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.67|      14|      29|     170|     183|       2
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  170-  183 (23.96/16.11)	LEASLDDEGLLDHT
  199-  212 (24.71/16.84)	IDGSLDDKKKTEHT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.40|      29|      29|    1240|    1268|       3
---------------------------------------------------------------------------
 1240- 1268 (50.10/39.59)	FLSATMLEQ.DGGESRVMVAMLKGYALAFF
 1270- 1299 (46.30/35.90)	FLSAAFAWGiDNSLSPKRRAKVVGLHLEFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.25|      29|     222|     624|     658|       4
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  624-  656 (47.73/47.26)	CGAS....LVRGWSVqeHtvLFITKLLSPLVP..........PTFSG
  850-  892 (42.53/22.94)	CIASirpgLVPGEPV..H..LLVDSLLSMMFRkvcngaepltPTTSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     132.49|      38|     392|     365|     404|       5
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  365-  404 (68.84/51.30)	TTWH...NTF...LGLWvaALRLVQRERDSRKGPMSRLDTCMCMLL
  756-  799 (63.65/41.23)	THWEvfsNAFtllLRFW..RFDHLPAERDATSSPFGSLFSPDCLLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      78.30|      20|      23|     966|     985|       6
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  973-  997 (31.03/16.20)	P...AFMNGTDWPSPA...............anlslVEEQIKK
  998- 1037 (19.88/ 7.67)	M...LAATGVDVPSLAvdgnspatlplplaafvsltITYKLDK
 1048- 1069 (27.40/13.42)	PamsALASGCPWPSLP....................IVTSLW.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.87|      39|     225|     697|     747|       7
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  697-  747 (56.88/66.73)	CS...LTDVELVnaacTFFADILYFchLPqvpllaAGLMIICEVFGSCVPDASW
  930-  971 (62.99/40.01)	CAhgrLSTRELA....TGLKDLADF..LP......ASLVTIASYFSAEVTRGIW
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.25|      35|     341|     241|     280|       9
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  241-  280 (51.91/52.97)	SLVHRnmSSHWGSF....IHQMQLLVSNSSvfrNLKHITAKTLL
  585-  623 (52.35/36.36)	SAVHE..ASVTGGFeeaeIEKIYEIATNGS...DEEKISAATIL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.64|      18|     253|     816|     833|      10
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  816-  833 (32.99/19.20)	QRLKRWSKILSLSV.EPVF
 1071- 1089 (29.65/16.56)	QKVKRWSNYFVLSAsRNVF
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.66|      19|     100|    1200|    1223|      12
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 1202- 1223 (30.54/28.62)	ARSMA.....RVQ.HAAllgASLVWISG
 1300- 1324 (27.12/10.71)	ARSLNrnislRCQcHCV...ASKAYISG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06982 with Med33 domain of Kingdom Viridiplantae
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