<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06972

Description U-box domain-containing protein 35
SequenceMQTSPSSLVAAGDATVIAVSGGRHSHSAVKWAVEHLLKRNSSCILIHVQTKSMHANDVVDVPKHGRTPTEEELHQLFLPFRGFCARKGIAAKELVLHDIDIPKALTDYVVENCISTVVIGADTSSWNTFMRKFSKDADVPNSLSKSLPENCTLYVIAKGKVQHIRPTGLPYHQHIHPHQQHIHPHQQHIKVKPTKSIRDIVTLLNNAPLVHPHMNLAETFVDSEDITIKSIKDPIGRDSGKAWESLREQTTSHKHNEGNNSPRGPEEYSSLQNSSTRSSSENSDNTGQMLDSPMADKSRGNHEVAVNSDKPKSLKPQLKVFKHKKYNFFLSYVVDLEMEMRKLKLELRKTTEKYGMACKEAVIAKQKATVLEKFRQEKERNVEEARHAEETALALAEVERQKAKAAMESAEMSQHLAEMEIRKRKEVELRAKQEEKERNKELHDVVCNSIPYRRYKTEELEAATDNFHDALKIGEGGYGPVFRGVIDHTVVAIKALRPDLVHGERQFQQELIVLSTIRHPSMVLLLGACPENGCLVYEYMENGSLEDCLFHKNNTPPIPWRTRFKIASEIATALLFLHQTKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPPSVADKTTQYRLTGAAGTFCYIDPEYQQSGLLGVKSDIYSLGVVLLQIITGKSPMGLSHLVEKALHKGTFSEVLDPSVTDWPVEEAMAFANLALKCCELRKRDRPDLGTIILPELNRISGIWDFEEQPR
Length744
PositionTail
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.06
Grand average of hydropathy-0.469
Instability index40.41
Isoelectric point7.68
Molecular weight83709.74
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein serine kinase activity	GO:0106310	IEA:UniProtKB-EC
protein threonine kinase activity	GO:0106311	IEA:UniProtKB-EC

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06972
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.56|      32|      33|     167|     199|       1
---------------------------------------------------------------------------
  167-  199 (57.59/39.94)	TGLPYHQHIHPHQQHIHPHQQHIKVkPTKSIRD
  202-  233 (53.97/32.83)	TLLNNAPLVHPHMNLAETFVDSEDI.TIKSIKD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.31|      45|     131|     556|     607|       2
---------------------------------------------------------------------------
  556-  607 (60.92/73.81)	PPIpwrTRFKIASEIATALLFLhqtKPEPLVHRDlKP..ANILLDK.NYVSKISD
  691-  738 (72.39/57.28)	PSV...TDWPVEEAMAFANLAL...KCCELRKRD.RPdlGTIILPElNRISGIWD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.26|      22|      25|     347|     371|       3
---------------------------------------------------------------------------
  347-  371 (29.04/29.32)	LRKTTEKygmACKEAVIAKQKATVL
  374-  395 (35.22/23.91)	FRQEKER...NVEEARHAEETALAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     177.72|      56|     370|      63|     119|       6
---------------------------------------------------------------------------
   63-  119 (91.61/70.40)	KHGRTPTEEELHQLF...LPFRGFCARKGIAAKElVLHD.IDIPKALTDYVVENCISTVVI
  432-  491 (86.11/61.23)	KQEEKERNKELHDVVcnsIPYRRYKTEELEAATD.NFHDaLKIGEGGYGPVFRGVIDHTVV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.80|      15|      25|     269|     284|       9
---------------------------------------------------------------------------
  269-  284 (21.29/17.84)	SSLQNSStRSSSE...NSD
  292-  309 (23.50/14.32)	SPMADKS.RGNHEvavNSD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06972 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RDSGKAWESLREQTTSHKHNEGNNSPRGPEEYSSLQNSSTRSSSENSDNTGQMLDSPMADKSRGNHEVAVNSDKPKSLKPQ
237
317










Molecular Recognition Features






MoRF SequenceStartStop




1) ISGIWDFEEQPR
733
744