<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06968
Description |
ATP-dependent DNA helicase hus2/rqh1 |
Sequence | MFSVPPKKPCHEEPLPGNATFGVQQSENIQGSRRVQVEKAWIALSSLQNFSRNYVQPGKSVEVTPQLREDRRTTSFPGGYENDKNRCPDVSTTPIVINHISQGLVGSVTSVNNHTKYTGQINESSKCMIADIGDDDLLGNIDVDQIVEKYQSTCTPKPSISKLPPTTPTAYNDNVLPPELCLDCIHGYKLGLCPEAASHLQELKDNLIAISNELLDNSENLNSTQIAKLRNDRSQLNKQIQQLEQYINCGNLNEERQKSHQFASTAPPTSFMYETPQQTVLCNGPKRDAYMGNGTYGSSFQCLPSFSVDNYSMSSAPVEREAFVPKIIEVNYIEGSGDKRWSSRDFPWTKELEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLANIPAAYLSANMEWAEQQEILRELNSDCCKYKLLYVTPEKVAKSDVLLRQLDNLHVRELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVIPKTKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLRECGHKCAFYHGTMDPAQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYSDYIRVKHMLSQGAIEQSPMTSGYNRSNMTNSGRVLETNTENLMRMVSYCENDVDCRRLLQLVHFGEKFNSSTCQKTCDNCLKITSFIEKDVTEIAKQLVELVKLMGQRFSSSHILEVYRGSLSQLVKKHRHETVSLHGAGKRLGKGEASRVLHHLVVEDFLVEEVKKSDYYGSVSSILKVNEPKVRNLYAGQRIILRFPSSVKASKPGKSDITPAKGSLTSGKPNVTLIDTPPEPQTEVDLNLSAKLYTALRMLRTSLVREAGEGVMAYHIFGNATLQQISKRVPRTKEELLDINGISKTKVSKYGDRLLEIIENTINEYYKLEKVSSGSKGSADSCKRRRGTNGGLNANDEDDDALTNSTGRSKRRTVKKQTRKDVVYDSPEEDYFHGCSDEDLDFDVIEIDALDQVTCKNAAGRVLPQWTAS |
Length | 1097 |
Position | Unknown |
Organism | Cajanus cajan (Pigeon pea) (Cajanus indicus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.494 |
Instability index | 47.32 |
Isoelectric point | 7.63 |
Molecular weight | 122976.05 |
Publications | PubMed=22057054
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Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro
ATP binding GO:0005524 IEA:UniProtKB-KW
hydrolase activity GO:0016787 IEA:UniProtKB-KW
nucleic acid binding GO:0003676 IEA:InterPro
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GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro
DNA repair GO:0006281 IEA:InterPro
DNA replication GO:0006260 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP06968
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.53| 35| 262| 170| 207| 1
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170- 207 (53.39/56.21) AYNDNVLpPELCLDCIHgYK.LGLCPEAASH....LQELkDNL
423- 462 (53.15/38.60) AEQQEIL.RELNSDCCK.YKlLYVTPEKVAKsdvlLRQL.DNL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 180.74| 58| 262| 311| 373| 2
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311- 373 (89.17/74.38) YSMSSAPVEREAfvPKIIEVN.....YiEGSGD..KRWSSRDfPWTKElEVN...NKRVFGNHSFRPNQREVI
572- 639 (91.57/56.88) YCLSRMDCEKVA..EKLRECGhkcafY.HGTMDpaQRASVQK.QWSKD.EINiicATVAFGMGINKPDVRFVI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.56| 19| 343| 648| 666| 3
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648- 666 (37.74/16.44) EGYHQECGRAGRDGQRSSC
992- 1010 (33.82/14.18) EYYKLEKVSSGSKGSADSC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.06| 14| 15| 874| 887| 4
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874- 887 (24.70/15.85) SVKASKPGKSDI.TP
891- 905 (20.36/11.71) SLTSGKPNVTLIdTP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 65.14| 22| 23| 755| 776| 5
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755- 776 (33.32/23.75) KITSFIEKDVTEIAK.QLVELVK
778- 800 (31.82/22.35) MGQRFSSSHILEVYRgSLSQLVK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.64| 11| 23| 720| 732| 8
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720- 732 (17.03/11.97) SYCENdvDCRRLL
744- 754 (22.61/10.01) STCQK..TCDNCL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.65| 18| 747| 103| 120| 9
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103- 120 (32.67/24.01) GLVGSVTSVNN...HTKYTGQ
845- 865 (25.98/17.44) GSVSSILKVNEpkvRNLYAGQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.48| 12| 15| 235| 246| 11
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235- 246 (20.46/16.09) QLNKQIQQLEQY
251- 262 (21.02/16.77) NLNEERQKSHQF
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