<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06939

Description Heat shock cognate 70 kDa protein 2
SequenceMAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASVQSDIKLWPFKVVAGPGDKPMIVVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIASLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKEKYKAEDEEHKKKVDAKNGLENYAYNMRNTIKDEKIASKLSADDKKKIEDAIESAIQWLDGNQLAEADEFEDKVKELESICNPIIAKMYQGAGAPDMAGGMDEDVPSSGAGGAGPKIEEVD
Length634
PositionUnknown
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.06
Grand average of hydropathy-0.379
Instability index31.74
Isoelectric point5.14
Molecular weight69287.67
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06939
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.72|      34|      41|     486|     520|       1
---------------------------------------------------------------------------
  486-  520 (52.96/34.71)	IDA.NGILNVSAEDKTTGQKNKIT..ITNDkEKYKAED
  527-  563 (48.76/27.56)	VDAkNGLENYAYNMRNTIKDEKIAskLSAD.DKKKIED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.56|      20|      41|     337|     356|       2
---------------------------------------------------------------------------
  337-  356 (33.75/25.01)	VHDVVLVGGSTRIP.KVQQLL
  381-  398 (26.48/17.89)	VQAAILSGEGNE...KVQDLL
  414-  434 (27.33/18.73)	GVMTVLIPRNTTIPtKKEQVF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.82|      16|      21|      13|      32|       3
---------------------------------------------------------------------------
   13-   28 (33.53/28.13)	DLG..TTYSCVGVWQHDR
   35-   52 (26.29/11.26)	DQGnrTTPSYVGFTDSER
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06939 with Med37 domain of Kingdom Viridiplantae
Unable to open file!