<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06937

Description U-box domain-containing protein 35
SequenceMWLPNPKSSGIRKGVGGGNGLVAVAIDKDKGSHYALKWAADSLLTRGQTVILLHVLHGTSSPVSRSNEAIICNINNSSASPQRYQVDNTIKDLFLTFHCYCTRKDIQCLDVLLEDTDVVKAITEYVSYAAIENLVVGATSRHGFIRFKSSSTSSSISKGAPDFCTVFVISKGKISSVRNATRPAAHISPLLSHIRELNNQDGNQPEISSKPMNLRERTSIKPHSWQDESIKSPFERGRGVSGISCMDFAESDTDISFVSSDRPSSGRSSSVYEYIDAGRTSRVSTSSDHSFESTRLGLKFNDPTSPDASFSLDSSRTSFSFSSQSMDEAEADMRRLKLELKQTMEMYSTACREALTAQQKLMELTSWRIEEEKKLEEARLAEEAALAIAEKEKARCRAAVETAEASKKIAEVESHRRASAEVKALKEAEEMRKLLDNLAQTDVRYRRYGIEEIEAATSSFSESQRIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFRKKKGVLSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGVIFLQLLTGRPPMGLAHHAEKSMENDTFAEMLDPCVTDWPLEQALCLANIAVKCAELRRKDRPDLAKVVMPELDKLRDFAEEKMTIPPFFGCIPSHTSEASVQPVRKPFLDAYPATLVRLPCNRYVT
Length775
PositionTail
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.07
Grand average of hydropathy-0.322
Instability index44.33
Isoelectric point6.53
Molecular weight86102.05
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06937
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.87|      16|      18|     285|     300|       2
---------------------------------------------------------------------------
  285-  300 (29.58/17.79)	TSSDHSF..ESTRLGLKF
  304-  321 (25.29/14.16)	TSPDASFslDSSRTSFSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.05|      19|     326|     412|     448|       3
---------------------------------------------------------------------------
  324-  343 (28.64/ 7.63)	QSMDEAEaDMRRLKLELKQT
  423-  441 (31.41/25.07)	KALKEAE.EMRKLLDNLAQT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.53|      14|      16|     369|     383|       4
---------------------------------------------------------------------------
  369-  383 (17.46/16.54)	IEEEKKlEEARLAEE
  388-  401 (23.06/16.21)	IAEKEK.ARCRAAVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.23|      33|     525|     173|     205|       5
---------------------------------------------------------------------------
  173-  205 (56.39/37.94)	KISSVRNATRP..AAHISPLLSHIRELNNQDGNQP
  701-  735 (51.84/34.29)	KCAELRRKDRPdlAKVVMPELDKLRDFAEEKMTIP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06937 with Med32 domain of Kingdom Viridiplantae
Unable to open file!