<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06928

Description Uncharacterized protein
SequenceMELEWDDGVKEGVLKRLKWWQQRSTKPPTAWVTELVEHLNSLGVALPSPELGELIVSQICFDNNHPWMWKFTHHALSSRLLFPFQILSLLASNVIPHRHAHPHAYALFLPLLAHHAFSFHPTPSLSSNLRIASSVDAALRLSETYKIRDLELGHVFVLFFYEVVVALIDCMLMDWGFQVAFSERSCLVAAATTDGGGEDCMEIDHGVTQGFKKSECHEQIRKRNPFTALEVLERLTESRKATILLQSVLLNMPEKFNCLQQRLQYLESLELASSELKLVNQVLTKVIANIRGVSCFDFCLSKHQLSPCWVSFDIYMENAMDSRQIPTKSAIDVLTEGIKTLQKLNQASWQETFLALWLSALRLVQRERDPPEGPIPHLVARLSVLLSIVPLAIANVLRDDSEHNSSSVQMSKESEYRHEMKSDGSMKLGLISSVQVLGHFSGLLCPPALVIDAANLAARKAASFIHNSMKGKGESGTGIHANANTKAGGNLRHLIVEACIARNLMDTSAYFWPGYASTSVMSLSDLSPLEKSPWSIFMEGTPLNNTLINSLTVTPAPSLTEIEKLYYIALNGSDVERPAAAKILCGASLSHGWYIQEHVVHHVIKLLASPVSPSHSGSWSLLVDNMPMLSAVLRGASSIDIVHILSLHGVVPTVAASLLPLCEAFGSIKPTSNSIGDESSTSIYMVFSLAFLFLIRLWKFCRPPLDQCITELGVSVGGLEYILSLYNNRVMFSQDKMKSNPSLSESASVKPVYIDSFPKLRALYCQYKSGVASALSGISTGNSIHQTANMILSMIYQKITKGGISSSNSSSPTSSNACSSLMNSGEDAFQRPMLPAWEVLEALPFVLESILTACVHGRLSSRDLTTGLRDLVDFLPASLAAIIDYFSSEVTRGVWKLVPMNGTDWPSPAAVLQSIESEIKAILTHVGVEVPNCSSGGSPIMLPLPMAALVSLSITFKLDKSLEYMHAITGAALENCASGCPWPSMPIIGSLWAQKVRRWHNFIVVSGSRSVFRHNNECVAQLLRSCFTSFLGTLCVSTSKLTAECCVNGLLGSTITAPGLYPFVAPGFLFLRSCRNIHNVQYVNDIIVGLVTEYSHELAGRRTGTGSRLILSGSIMWGVGTKLPPGTFSRRNRTIEVHLEFLAEVMEKKISLSCNPITWKTYVCCLVGLMVRLAPAWVQEVKVDTLRKLARGLSRWNEVELALSLLHRGGTAAMGALAEFVNVIDSEHMSPCS
Length1233
PositionTail
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.08
Grand average of hydropathy0.150
Instability index48.28
Isoelectric point6.98
Molecular weight135389.21
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06928
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.93|      18|      31|     169|     186|       1
---------------------------------------------------------------------------
  169-  186 (37.27/24.31)	DCMLMDWGFQVAFSERSC
  199-  216 (35.66/22.96)	DCMEIDHGVTQGFKKSEC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     102.76|      24|      31|     721|     744|       2
---------------------------------------------------------------------------
  721-  744 (40.89/29.04)	YILSLYNNRVM...FSQDKMKSNPSLS
  753-  776 (38.66/27.00)	YIDSFPKLRAL...YCQYKSGVASALS
  790-  814 (23.22/12.87)	MILSMIYQKITkggISSSNSSSPTS..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     126.34|      29|      33|      65|      93|       3
---------------------------------------------------------------------------
   31-   57 (35.77/15.64)	..WVTE.....LVEHLNSLGVALPSPELGELIVS
   65-   93 (54.16/27.14)	HPWMWK.....FTHHALSSRLLFPFQILSLLASN
  101-  128 (36.41/16.04)	HPHAYAlflplLAHHA......FSFHPTPSLSSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.23|      24|      83|     520|     543|       4
---------------------------------------------------------------------------
  520-  543 (42.69/24.13)	VMSL..SDLSPLEKSPWSIFMEGT....PL
  553-  579 (29.34/14.12)	VTPA..PSLTEIEK.LYYIALNGSdverPA
  603-  628 (35.20/18.51)	VIKLlaSPVSPSHSGSWSLLVDNM....PM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.75|      17|      77|    1073|    1090|       5
---------------------------------------------------------------------------
 1073- 1090 (27.80/21.90)	SCRNIHNVQYVNdIIVGL
 1153- 1169 (35.95/23.37)	SCNPITWKTYVC.CLVGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.63|      48|     342|     288|     378|       6
---------------------------------------------------------------------------
  232-  281 (73.49/77.68)	LERLTESRKatILLQSVLLNMPEKFNCLQQRLQ..YLES.LELASSELKLVNQ
  316-  366 (72.14/58.71)	MENAMDSRQ..IPTKSAIDVLTEGIKTLQKLNQasWQETfLALWLSALRLVQR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.68|      35|     189|     840|     875|       7
---------------------------------------------------------------------------
  840-  875 (56.92/43.60)	LEALpFVLESILTA..CVHGRLSSRDLTTGLRDLVD....FL
 1031- 1071 (53.76/35.32)	LGTL.CVSTSKLTAecCVNGLLGSTITAPGLYPFVApgflFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.33|      30|     677|     415|     447|      10
---------------------------------------------------------------------------
  415-  447 (45.78/37.75)	EYRHEM...KSDGSMKLGLISSVqVLGhfSGLLCPP
 1093- 1125 (50.55/29.60)	EYSHELagrRTGTGSRLILSGSI.MWG..VGTKLPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.49|      20|     342|     288|     307|      13
---------------------------------------------------------------------------
  288-  307 (39.09/22.74)	ANIRGVSCFDFC..LSKHQLSP
  631-  652 (29.40/15.36)	AVLRGASSIDIVhiLSLHGVVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.67|      18|      41|     927|     944|      15
---------------------------------------------------------------------------
  927-  944 (34.32/21.64)	GVEVPNCSSGGSPIMLPL
  970-  987 (37.35/24.33)	GAALENCASGCPWPSMPI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06928 with Med33 domain of Kingdom Viridiplantae
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