<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06927

Description Luminal-binding protein 5
SequenceMARSFSRGSLLPLAIVSLGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGENKVFSPEEISAMVLTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDTRNSLETYVYNMKNQVSDKDKLADKLEADEKEKIETAVKEALEWLDDNQTVEKEEYEEKLKEVEAVCNPIITAVYQRTGGAPGGGASGDGEDDDSHDEL
Length667
PositionUnknown
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.06
Grand average of hydropathy-0.445
Instability index28.40
Isoelectric point5.10
Molecular weight73446.34
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06927
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.32|      17|      21|      66|      83|       1
---------------------------------------------------------------------------
   66-   83 (27.98/24.66)	NR..ITPSWVAFtDSERLIG
   88-  106 (26.34/17.47)	NQaaVNPERTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.30|      11|      31|     231|     241|       2
---------------------------------------------------------------------------
  231-  241 (20.46/11.09)	LGGGTFDVSIL
  259-  269 (21.85/12.31)	LGGEDFDQRIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     220.29|      79|     193|     131|     230|       3
---------------------------------------------------------------------------
  131-  230 (100.77/114.15)	KPYIQVKIKDGENKVFSpeeiSAMVLTKmKETAEAFLGKKINDAVVTVPA.............YFNDaqRQATKdaGViaglnvariiNePTaAAIAYG.......LDKKGGE..KNILVFD
  326-  426 (119.52/76.07)	EPLTRARFEELNNDLFR....KTMGPVK.KAMDDAGLQKSQIDEIVLVGGstripkvqqllkdYFDG..KEPNK..GV..........N.PD.EAVAYGaavqgsiLSGEGGEetKDILLLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.66|      26|      26|     550|     575|       4
---------------------------------------------------------------------------
  550-  575 (40.63/21.27)	VREAE.EFAEEDKKV.KERIDTRNSLET
  577-  604 (28.03/12.71)	VYNMKnQVSDKDKLAdKLEADEKEKIET
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.57|      16|      21|     491|     506|       5
---------------------------------------------------------------------------
  491-  506 (30.33/18.02)	DLSGI...PPAPRGTPQIE
  512-  530 (22.23/11.34)	DANGIlnvKAEDKGTGKSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.03|      13|     193|     282|     294|       7
---------------------------------------------------------------------------
  282-  294 (22.19/14.50)	KDISKDNRALGKL
  478-  490 (23.83/16.11)	RSLTKDCRLLGKF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06927 with Med37 domain of Kingdom Viridiplantae
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