<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06926

Description Luminal-binding protein 4
SequenceMAGSWARRSLVVLAIISFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGENKVFSPEEISAMVLTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQISDKDKLADKLESDEKDKIETAVKEALEWLDDNQTVEKEEYEEKLKEVEAVCNPIISAVYQRSGGAPGGASGEDEDDSHDEL
Length665
PositionUnknown
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.06
Grand average of hydropathy-0.438
Instability index30.29
Isoelectric point5.10
Molecular weight73363.26
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06926
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.32|      17|      21|      66|      83|       1
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   66-   83 (27.98/23.03)	NR..ITPSWVAFtDSERLIG
   88-  106 (26.34/16.29)	NQaaVNPERTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     499.25|     171|     193|     131|     322|       2
---------------------------------------------------------------------------
  131-  216 (59.68/59.47)	.............................................................................................................................KPYIQVKIKDGENKVFSPEEISAMVLTKMKETAEAFLGKKIN...DAVVTVPA.............YFNDAQRQAT.KDaGViaglnvariiNePTaAAIAYG
  217-  403 (229.94/175.18)	LDKKGGE..KNILVFDLggGTFDVSILTIDNGVFEVLATNG.....DTHLGGEDFDQRiMEYFIKLIKKKhgKDISKDNRALGKLRREA.ERAKRAlSSQHQVRVEIESlfDGV........dfsEPLTRARFEELNNDLFR....KTMGPVK.KAMDDAGLQKSQI...DEIVLVGGstripkvqqllkdYFDG..KEPN.K..GV..........N.PD.EAVAYG
  411-  588 (209.62/131.02)	LSGEGGEetKDILLLDV..APLTLGIETVGGVMTKLIPRNTviptkKSQVFTTYQDQQ.TTVSIQVFEGE..RSLTKDCRLLGKFDLSGiPPAPRG.TPQIEVTFEVDA..NGIlnvkaedkgtgKSE.KITITN.EKGRLSQEEIERMV.REAEEFAEE..DKKVKeriDARNSLET.............YVYNMKNQISdKD........................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.23|      15|      26|     592|     606|       3
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  592-  606 (24.18/15.70)	DKLESDEKDKIETAV
  620-  634 (24.06/15.58)	EKEEYEEKLKEVEAV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06926 with Med37 domain of Kingdom Viridiplantae
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