<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06925

Description Uncharacterized protein
SequenceMGEGNDVWEGVMEATKWAQENKTDPLLWSIQVTSILNSAGVSLPSIQLAHRLVSHICFDNHLPITWKYLEKAMAVRLVPPLLVLSLLAARVVPHRRLHPAAYALYIDLLNRHAFSLSSNLHSPNYPKVMASLHHALRLSQPFSSPGLLLVHFVFAVVSQLLEASLDDDGLLQPQDALHVDMLIDAPNHNKDALHRKNTAMAIQLIARFLHDKVTSRILSLVQRNMPAHWGPFVHQLQRLAGNSILLRNLKHVTPESLVPLNFNSTAGIKLLSSEWKTTPKLELSAVMAAGADSCAVQSRHDSWSLLWLPIDLILEDAMDGNHVAENSAVEVLTGLVKALQAVNGTAWHSAFLGLWIAALRLVQRERDPSEGPVPRLDTCLCMLLCITTLVVANLIEEEEGELIEEAERSPTNQRKDKQALGVRRGELVISLQLLGDYENLLSPPQSVIWGANQAAAKATLFVSGQSGYLEYTNVNDLPTNFSGNLRHLIVEACIARHLLDTSAYFWPGYVSAPCNQLPHSIPNHLPSWSSLMKGSSLTPQLVNVLVATPASRYAATSSFLPSYITSLGCHVSLAEIEKIFEFAINGSDEEKISAATILCGASLVRGWNVQEHIIFFIIKLLSPPVPPTYSGTESYLISYAPFLNVLLLGISPVDSVHIFSLHGAVPLLAAVLMPICEAFGSCIPNVSWTAVTGEKLTCHAVFSNAFILLLRLWRFSLPPIEHVMGGAATPALGSQLGPEYLLLVRNCMLASFGKSPKDRVRSRRFSKLISFSTEPLFMDSFPKLNIWYRQHRECIESTCSTLAPGPGGSVSQIVEALLSMMCRKINRSAQTLTPTTSGSSNSSTSSLDDALMKLKVPAWDILEATPFVLDAALTACAHGRLSPRELATGLKDLADFLPATLGTIVSYLSAEVTRGVWKPAFMNGTDWPSPAANLSTVEQQIKKILAATGVDVPSLAIDGNGPATLPLPLAAFLSLTITYKLDKSYERFVVLVGPSLIALSSGCPWPCMPIVGALWAQKVKRWSDFFVFSASATVFHHSRDAVVQLLKSCFTSTLGLGSACIYNNGGVGTLLGHGFGSHVSGGISPVAPGIFYLRVFRSIRDVMFLTEEIVSLLMLSVRDIANGYALASFAVLSGTFAWGIDTSSPASKRRPKVLEIHLEFLANALDGKVSLRCDCATWRAYVSGVMSLMVSCTPLWIQELDVGMLKRISNGLRQLNEEDLALRLLEIKGTSVMGEVAEMISQSRF
Length1245
PositionTail
OrganismCajanus cajan (Pigeon pea) (Cajanus indicus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Cajanus.
Aromaticity0.08
Grand average of hydropathy0.230
Instability index46.03
Isoelectric point6.77
Molecular weight135732.75
Publications
PubMed=22057054

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06925
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     251.43|      64|     335|     524|     588|       1
---------------------------------------------------------------------------
  524-  587 (107.09/61.85)	HLPSWSS.LMK.....GSSLTPQLVNV.LVA..TP..ASRYAATSSFLPSYITSLGC.HVSLAEIEKIFEFAINGS
  597-  664 (86.40/44.71)	ILCG.AS.LVR.....GWNVQEHIIFF.IIKllSPpvPPTYSGTESYLISYAPFLNVlLLGISPVDSVHIFSLHGA
  666-  727 (57.94/29.05)	..PLLAAvLMPiceafGSCI.P...NVsWTA..VT..GEKLTCHAVFSNAFILLLRLwRFSLPPIEHVMGGA....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     231.45|      75|     687|     287|     367|       2
---------------------------------------------------------------------------
  287-  367 (114.76/88.73)	MAA.GADSCAVQSRHDSWSLLWLPID..LILEDAMDGNHVAENSAVEVLTGLVkALQavNGTAWHS.AFLG.LWiaALRlVQRERD
  945- 1024 (116.69/71.24)	LAAtGVDVPSLAIDGNGPATLPLPLAafLSLTITYKLDKSYERFVVLVGPSLI.ALS..SGCPWPCmPIVGaLW..AQK.VKRWSD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.64|      14|      14|     194|     207|       3
---------------------------------------------------------------------------
  194-  207 (23.64/17.13)	HRKNTAMAIQLIAR
  210-  223 (23.01/16.47)	HDKVTSRILSLVQR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.22|      20|      21|      97|     117|       4
---------------------------------------------------------------------------
   97-  117 (31.12/24.19)	LHPAAYALYIDLLnRHAFSLS
  120-  139 (37.11/23.90)	LHSPNYPKVMASL.HHALRLS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06925 with Med33 domain of Kingdom Viridiplantae
Unable to open file!