<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06777

Description Uncharacterized protein
SequenceMGREAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFSDPIVQSDIKLWPFQVRAGAHDVPEIVVSYKGEDKVFKAEEISSMVLIKMKETAQAYLGADREVKKAVVTVPAYFNDSQRQATKDAGMIAGLEVLRIINEPTAAAIAYGLDKKDSGLGERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDERLVNHFANEFQRKFKKDLKTSPRALRRLRTACERAKRTLSSAAQTTIELDSLFEGVDFATSITRARFEELCMDLFRKCMDPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELNKSINPDEAVAYGAAVQAAILTGEGGEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVIFDIDANGILNVSAEDKTTGNKNKITITNDKGRLSKDEIERMVQEAEKYKADDEELKKKVEAKNSLENYAYNMRNTIREEKVASQLSASDKETMEKKLTEAMDWLEHNQMAEVEEFEHKLKELEGVCNPIITRLYQGGAGGMPGGAPTGAAPSGGSGAGPKIEEVD
Length648
PositionUnknown
OrganismGonium pectorale (Green alga)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Chlorophyceae> CS clade> Chlamydomonadales> Volvocaceae> Gonium.
Aromaticity0.06
Grand average of hydropathy-0.399
Instability index31.03
Isoelectric point5.23
Molecular weight71165.90
Publications
PubMed=27102219

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06777
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     189.18|      63|      74|     440|     513|       1
---------------------------------------------------------------------------
  440-  508 (87.91/75.85)	NQPGVLIQvyEGERARTKDNNLLGKFELTGiPPAPRGVPQINVIFDIDANGILnvSAEDKTTGNKnKIT
  519-  581 (101.27/55.62)	DEIERMVQ..EAEKYKADDEELKKKVEAKN.SLENYAYNMRNTIREEKVASQL..SASDKETMEK.KLT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     141.01|      36|      73|       1|      36|       3
---------------------------------------------------------------------------
    1-   36 (63.38/43.07)	MGRE..APAIGIDLGTTYSCVGVWQNDRVEIIANDQGN
   38-   58 (23.17/11.15)	...............TTPSYVAFTDTER..LIGDAAKN
   75-  112 (54.46/36.00)	IGRKfsDPIVQSDIKLWPFQVRAGAHDVPEIVVSYKGE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06777 with Med37 domain of Kingdom Viridiplantae
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