<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06776

Description Uncharacterized protein
SequenceMYGLTHPVKLEADVLASQTFSHAGLVSAPPIGACDDDVPPPVPDELLPPSEELLRGQLAAVRLPVGNAAPTQSAWCAVSNLIAVALSPEPGSSVAQILVLEPSHPEDCTALELPMAGPGDHVSSLEWSWPGQRRALLSATASGRVVVWTQPSQQGQDESVFPRCIDDWHGQLLLDAGDSAASGSGGAGSKTGGPQVKVEPGGAAAGVVATGAHVQVKVEPGADGADSGGGAVADQSAHLEAAAGAHGAGHGGPWRLPALAGVCWLRQPAGGRAWSTAALGAKRLDSSGPEGGGGGGGAGSGENFDSLFSEPAVAGAVPHWARPHQLTAAVLTADGVLTLLWALASKLPNTLSWHRSRPLHVPAPPPVASAAELPDGADGGDAAAPGDGGGGAGGGALPPEWRLAHGSMAALHDGTLSLAVVYDRRRDGVYVYGMRGNPTLGGSPVGQPGAAVPPAAPTATSAAAAPTVSFQAALALREGVSARQCRLHVSGCATRRLFVLGQESVAGAAAGAGDAGAIGSCDREVAPVAVVASFRAESPDAGGGAKAAAGGGVTTWRCERYSQLLLARCGGGDGGGGRCEWEPPAAAGPPDMSLLAGGRALPCHRSVLAARCEALRRRLPPPGADGGGSPVLLELPDADPNATAITLHALYEGGGDGAAAAASALGDLLPAPLAAATAALAEQLGLGELAAAAAAVAAAVGPRLSALRQLHAANGGGSSGGGAPPQQPTISPVPGAPVGPVSEAAVIAAAKHGELPKPLLLRSLQSLFPGPFHLHCGRTKGLTTPAALAQTLRQESLQAVVSLPKEAIMERYRALGLQAQLTDPRVAPHAAARSMWMSFRGPAPPPELHGHVLSQAAVSSRQRQRWRRQRGAALALGASAPLWSHTQGVLPDCLTGAPLPPGTSWSLEGASAGGAVTAAMGPGVGPAGGRHGLPPLLAALQRAWVCCAAPAELGSPWRRARLGQELDLQY
Length970
PositionTail
OrganismGonium pectorale (Green alga)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Chlorophyceae> CS clade> Chlamydomonadales> Volvocaceae> Gonium.
Aromaticity0.04
Grand average of hydropathy0.005
Instability index52.06
Isoelectric point6.26
Molecular weight96748.07
Publications
PubMed=27102219

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06776
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.64|      18|      19|     185|     203|       1
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  185-  203 (28.85/10.69)	GGAGSKTGGPQVKvEPGGA
  719-  736 (26.79/ 6.32)	SGGGAPPQQPTIS.PVPGA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     317.46|      51|      51|     536|     586|       2
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  269-  313 (41.85/ 7.24)	AG.GR.AW......STAA....lgAKRldssgPE....GGG.....G.....GG............GAGS.......GENF..............DSLF........SE.....PAV
  314-  388 (41.62/ 7.15)	AG.AVPHW....A.RPHQ....ltAAV.....LT....ADGvltllWALASKLP............NTLS.....WHRSRP..lhvpapppvasaAELPDGAD....GGdaaapGDG
  439-  515 (41.12/ 6.96)	TL.GGSPV....G.QPGA......AVP.....PA....APT.....ATSAAAAPtvsfqaalalreGVSA.....RQCRLHvsgcatrrlfvlgqESVAGAAA....GA.....GDA
  516-  574 (74.45/19.81)	GAiGSCDR....EvAPVAvvasfrAES.....PD....AGG.....GAKAAAGG............GVTT.....WRCERY..............SQLLLARC....GG.....GDG
  575-  626 (70.21/18.17)	GG.GRCEW....E.PPAA......AGP.....PDmsllAGG.....RA.LPCHR............SVLA.....ARCEAL..............RRRLPP......PG.....ADG
  830-  888 (48.21/ 9.69)	AA.ARSMWmsfrG.P.........APP.....PE....LHG.....HVLSQAA..............VSSrqrqrWRRQRG..............AALALGASaplwSH.....TQG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.05|      18|      22|     212|     229|       4
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  168-  184 (27.35/12.35)	WHGQLLLDAG.DSAASGS
  212-  229 (32.66/16.58)	AHVQVKVEPGADGADSGG
  237-  252 (27.04/12.11)	AHLE..AAAGAHGAGHGG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.87|      28|      29|     635|     662|       5
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  635-  662 (49.35/21.08)	LPDADPNATAITLHALYEGGGDGAAAAA
  665-  692 (43.53/17.62)	LGDLLPAPLAAATAALAEQLGLGELAAA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.96|      11|      51|     893|     905|       6
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  893-  905 (20.55/11.38)	CltGAPLPPGTSW
  947-  957 (22.41/ 7.49)	C..AAPAELGSPW
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.76|      17|     273|     126|     146|      12
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  113-  133 (30.56/18.50)	LPMAGPGDHVssleWSWPGQR
  137-  154 (25.21/ 6.07)	LSATASGRVV...vWTQPSQQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06776 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AGDSAASGSGGAGSKTGGPQVKVEPGGAAA
2) STAALGAKRLDSSGPEGGGGGGGAGSGENFD
3) VATGAHVQVKVEPGADGADSGGGAVADQSAHLEAAAGAHGA
4) WHRSRPLHVPAPPPVASAAELPDGADGGDAAAPGDGGGGAGGGALPP
176
275
208
353
205
305
248
399










Molecular Recognition Features






MoRF SequenceStartStop




NANANA