<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06729
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MADLPDASMMDGAMDDLFGEAPVGLDGGIAMPPAPLPASLILRIAEMQSRGCCTVTRKLAWSNVGSIAQICPDGSQVTFRTMIRDKKTGTWTISDDSKYPFKAPDGRKFVHIQFSGIGVDLVVVDDAGHVHLPSMTGAMGKMSTTQGELARDDSKHELNAIVGLHWLALFPAEFRGPYIDAAHKNGDRWDATMKQRDQQGLRAHHPAESRHAFLHISRSTELTLCYQNEGQGWQSTSVMLDTPRTSDGLVTHAALGEDNSDLLAVTYDTASRLRLYRVSIVWNASQQSRGPGVNFLRVEPTLDVHHLTAVNNVRPQQIDAAKLTHLRIIPQVAEAAQQVPTLPNILAIFTHAAFPSHTSPDQSSTSVIARWSVETFAPTLHESFTKLKPGGNTNQVLHQITVLKRQPDVSTNGKVILTFESQMFDTILAFANSDGSLDLRDRITMEPLGPFGSTDTVSNLHQSGFDHVPGEHNLHVAMSVDGSALVYVRVDKKIDAQCMKLTRGWHVVDDGISDDRPYIEAAAVCIARQFAFLCYNNMATDETLALLPPDASPELRSLVVRMIFRMLNRSPDISMQESSRQQMIVLKEPLVPRCLSAQLALGTNPMTGERNFAAQYAFAVLNLRLAGTALASTCGRSDVKQISPEAVHFARGLVRWCMDLIVYIVNTIVTIQRDVKAGSTAKKVIDKLTSTSGSPALHLLLCSFSRTLVRFQTIWVVKYFQCLQHVVPRIRSVTERQEMEAVFSLAGQLPFKLQQFEGMVVEVDQVVRQAYTKSNLSADRRGELEINMMVDGTIPPELEPAVNSLLETTIPKLTENMDLGKLHFYDTSFLQLWTNKRENHGRIIDVLRKVQVPLDAALRTCRRCGSEMEDIPPEKLRQELFAGWFHHAQRYCVCMNYWFVA |
Length | 901 |
Position | Tail |
Organism | Pseudocercospora eumusae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes>
Dothideomycetidae> Mycosphaerellales> Mycosphaerellaceae> Pseudocercospora.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.151 |
Instability index | 40.08 |
Isoelectric point | 6.51 |
Molecular weight | 100114.53 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP06729
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 137.39| 48| 75| 300| 374| 1
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300- 354 (64.65/101.36) PTLdvHHltAVNNVRP....QQIdAAKLTHLRIIPQVAEAAQQVPTLPNilAIF.THAAF
378- 430 (72.75/41.59) PTL..HE..SFTKLKPggntNQV.LHQITVLKRQPDVSTNGKVILTFES..QMFdTILAF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.35| 15| 127| 738| 758| 3
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738- 758 (22.43/26.23) EMEAVfslagqLPFKLQQ..FEG
867- 883 (24.92/13.73) EMEDI......PPEKLRQelFAG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.21| 26| 548| 272| 297| 8
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272- 297 (45.87/32.94) RLRLYRVSI..VWNASQQSRGPGVNFLR
821- 848 (42.34/29.79) KLHFYDTSFlqLWTNKRENHGRIIDVLR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 65.53| 21| 308| 456| 482| 9
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456- 482 (26.59/35.61) TVSNLHQsgfDHvPGEhnLHVAMSVDG
772- 792 (38.94/24.20) TKSNLSA...DR.RGE..LEINMMVDG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.42| 25| 549| 58| 84| 16
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58- 84 (42.41/29.51) KLAWSNVGS......IAQICPDGsqVTF.RTMIR
624- 655 (32.01/16.28) RLAGTALAStcgrsdVKQISPEA..VHFaRGLVR
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