<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06722

Description Uncharacterized protein
SequenceMSPTCRPSCSHAPLLLFLFTMLAILLITLVAIAGLADPGLVLAFVSPSPRKEESSDKHSASILPYFALQKVLKEASPIYGTTAVNYGAESDTATWMSAYHDETLLVHMNIPGTHHAASWNHASAAQDSLEYINHLANLSAVRPDFYRCQARSIAVMLDAGIRVFDLRYALDVTRTNLVFWHGDALQSETASVDDVLYSLYNWLEWHKSEAILLSFQYEAGGNDAVTQAMLYATLTSPAARQYMVQARGDLGTLGQARGKITLLRRFDLDLLPPVYENSIPGVHFPPNNWTDNGPDMALIYNKTTGATAYIEDYYQPLTPNNSTAETNIRWKVNATEAHLRKAAWGDHPDSLYWTFASSTNTGHNPPITPVIQALGNGSKSTPDGGVNDQLLPFFQSMRGERLGIVMFDFYDDVVELVPTFLGLLAPDESVRFSGKHICCANFESRSRCRCFLLHNNPCFQIDSASASSSNQIIDTLTVLKTHKMFAQFQTSYSGIETSLQKLTDSIAAYNPSVRDAEELLAADEAVNKNIEQLVTHQQNHQRLASLRATADALDATIQNTIRLLADTRRDIQSIPSVDSEDRREVGVEELLQYAKFIAPTTVAPTFRKPLPDEDEQMPKKKEGATEVGANGIVTPVDVDTNPAYTKSGQDKKEAEPAAPPPPPPPPLPAYDFVPWPDHGKITAGALGDIQRMLDAGQDPAAVLSAEEQAEVDRKRKEQEAEERKRAEELERQQRDAFGDYSSGRRGTVVFNPDDL
Length755
PositionMiddle
OrganismPseudocercospora eumusae
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Dothideomycetidae> Mycosphaerellales> Mycosphaerellaceae> Pseudocercospora.
Aromaticity0.08
Grand average of hydropathy-0.342
Instability index46.22
Isoelectric point5.10
Molecular weight83339.56
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
phosphoric diester hydrolase activity	GO:0008081	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
lipid metabolic process	GO:0006629	IEA:InterPro
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06722
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.42|      18|      23|     357|     374|       1
---------------------------------------------------------------------------
  357-  374 (32.27/17.28)	SSTNTGHNPPITPVIQAL
  380-  397 (33.16/17.94)	STPDGGVNDQLLPFFQSM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.21|      17|      23|      85|     101|       2
---------------------------------------------------------------------------
   85-  101 (32.91/20.02)	NYGAESDTATW..MSAYHD
  109-  127 (27.30/15.41)	NIPGTHHAASWnhASAAQD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     188.21|      54|      55|     599|     653|       4
---------------------------------------------------------------------------
  599-  653 (91.16/52.01)	PTTVAPTFRKPLPDEDEqMPKKKEGATEVGANG.IVTPVDVDTNPAYTKSGQDKKE
  656-  710 (97.05/51.81)	PAAPPPPPPPPLPAYDF.VPWPDHGKITAGALGdIQRMLDAGQDPAAVLSAEEQAE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06722 with Med4 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) VAPTFRKPLPDEDEQMPKKKEGATEVGANGIVTPVDVDTNPAYTKSGQDKKEAEPAAPPPPPPPPLPAYDFVPWPDHGKITAGALGDIQRMLDAGQDPAAVLSAEEQAEVDRKRKEQEAEERKRAEELERQQRDAFGDYSSGRRGTVVFNPDDL
602
755










Molecular Recognition Features






MoRF SequenceStartStop




1) DFVPW
671
675