Description | Mediator of RNA polymerase II transcription subunit 19 |
Sequence | MSVSEQSHAANFISSHTSPNQATVQPPNISSPPSSAPMSTQVSQQPTMSTTNSFPTPASSVSGHPTNATSEDADQGRKSFNTGIQDSAENSGASPTQQPTQHKPTGHDRQTLQTDGTNDFATGQGQYSTEPDAMDIDTQPTSRADTLSLSLDSLQKELTSAFHLCKSSPIVTGPDPSVDLVSLYGLGPIAHSVARMDPVTGEKINRLRKSYEGKLKGLGLAGRNKPLKQEIGAPGSLRYMTLWPEEEWQNQKVHGKAIKVSDMDSALHNLQSRAMQMEPGPIPNNDFWEDILGHEKPVKNPAAGETGKKATPGLAARPSTQSYAASPRSQEAERPRPSRGRKRHYDDNSFAGYGEGFVDDDDDPGFYSNGEGTGKKKRKKDHVAKVSTPMSERSTSYGVGMFGIGAR |
Length | 407 |
Position | Head |
Organism | Penicillium patulum (Penicillium griseofulvum) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.883 |
Instability index | 46.60 |
Isoelectric point | 6.47 |
Molecular weight | 43719.57 |
Publications | PubMed=26729047 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364151 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP06630 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 158.83| 48| 92| 187| 236| 1 --------------------------------------------------------------------------- 187- 236 (79.78/49.02) GPIAHSVARMDPVTGEK.INRLRKSYEGKLKGLGLAGRnkPLKQEIGA.PGS 280- 329 (79.05/43.34) GPIPNNDFWEDILGHEKpVKNPAAGETGKKATPGLAAR..PSTQSYAAsPRS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 142.60| 35| 40| 55| 89| 2 --------------------------------------------------------------------------- 10- 45 (38.59/14.63) .....AN.FISSHtsPNQATVQPPNisSPPSSAPMST.QVSQQ 55- 89 (61.25/26.97) PT..PAS.SVSGH..PTNATSEDAD..QGRKSFNTGI.QDSAE 95- 130 (42.76/16.90) PTqqPTQhKPTGH..DRQTLQTD.....GTNDFATGQgQYSTE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 45.83| 11| 14| 346| 356| 3 --------------------------------------------------------------------------- 346- 356 (22.39/14.50) DDNSFAGYGEG 362- 372 (23.44/15.55) DDPGFYSNGEG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FWEDILG 2) GYGEGFVDDDDDPGFYSN 3) KKKRKKDHVAKVST 4) YGVGMFGI | 287 352 375 397 | 293 369 388 404 |
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