<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06600

Description HHL195Wp
SequenceMNNQHHIQQNKFYSISNQGPGRNAWSHQQQQLLDSKGNTNNSKSPMLMANNNVFSIGPYRQRKDASRVSVLERFEIIGYIASGTYGKVYKAKAKSPVAEDSNSSSKNGLINGSMLNLDNNHGNISLKDVDGNVNDNLHINEEVLKDSISPSNNNAPDLGHGNRGSGNSMKLSPKKKGSTRFYAIKKFKTEREGVEQLHYIGISQSACREMSLCRELDNKHLTKLVEIFLEKKSIYMVSEFAEHDLLQIIHFHYHPEKRLIPARMLKSIMWQILDGVSYLHQNWILHRDLKPANIMVTVDGCVKIGDLGLARKFYNMVQTLYTGDKVVVTIWYRAPELLLGARHYSPAIDLWAVGCILAELIGLRPIFKGEEAKMDSKKSVPFQSNQLQRILEVLGTPTQQNWPNIHKYPEYEQLAKFSKYRDNLAVWYQSSGGRDKSALDLLYRLLKYDPITRIDAIHALEHEYFTNNDPPVAENVFEGLNYKYPPRRIHTNDNDIMNLGVKNKNVFNPHNTQQQSVNNGGGANSSIGGLGVNRRILAAAAAAAAAVQGNSGNITSGSSSANGPRRKKKR
Length570
PositionKinase
OrganismEremothecium sinecaudum
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetaceae> Eremothecium.
Aromaticity0.08
Grand average of hydropathy-0.573
Instability index44.27
Isoelectric point9.50
Molecular weight64023.86
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06600
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     219.93|      68|      79|     192|     270|       1
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  192-  263 (104.39/101.88)	EGVEQLHYIGISQSACREMSLCRELDNkhLTKLVEIFLEKKSIYMVSEFAEHDLLqIIHFHYH.PEkRLIPAR
  274-  342 (115.55/77.41)	DGVSYLHQNWILHRDLKPANIMVTVDG..CVKIGDLGLARKFYNMVQTLYTGDKV.VVTIWYRaPE.LLLGAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     146.61|      44|     450|       6|     112|       2
---------------------------------------------------------------------------
   14-   63 (74.68/133.15)	SISNQGPGRNAWSHQQQQLLDSKGNTNNSKSPMLMANnnvfsiGPYRQRK
  526-  569 (71.93/21.64)	SIGGLGVNRRILAAAAAAAAAVQGNSGNITSGSSSAN......GPRRKKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.79|      37|     372|      64|     100|       3
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   64-  100 (61.67/39.57)	DASRVSVLER...FEIIGYI.ASGTYGKVYKAKAKSPVAED
  435-  475 (56.12/35.41)	DKSALDLLYRllkYDPITRIdAIHALEHEYFTNNDPPVAEN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06600 with CDK8 domain of Kingdom Fungi
Unable to open file!