Description | Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MSSPSSSGSAERPPAAPPQEDAQPPPEFDTSLFPAPPAFYHRYTDADLANLDPPNVDWITQDGSYTVFGETWPVEETTPTLKEMGVPEMFDPDSDRKLSLQSLLRTLILTYTQLLDALLTPPPSLAHPEPTLPTDPERLTEHMRLICINMHYLVNELRPVQARETLKAMMQSQIDLRRRKTAAIKRKCAGITAQLAALQTRTLEAANAQPPLKSHPRLDPSPAEAAATAAQETLDIFAKLRARAAAADAGV |
Length | 251 |
Position | Middle |
Organism | Rhodotorula sp. JG-1b |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Microbotryomycetes> Sporidiobolales> Sporidiobolaceae> Rhodotorula> unclassified Rhodotorula. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.418 |
Instability index | 62.27 |
Isoelectric point | 5.17 |
Molecular weight | 27522.94 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP06594 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 55.07| 18| 65| 162| 183| 1 --------------------------------------------------------------------------- 162- 183 (25.52/24.58) ARETLKAMMQsqidLRRRKTAA 230- 247 (29.55/17.69) AQETLDIFAK....LRARAAAA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 137.81| 42| 85| 28| 74| 2 --------------------------------------------------------------------------- 28- 74 (65.18/43.80) FDTSLFPaPPAFYHryTDADLANlDP....PNVDWITQDGSYTVfGETWPV 115- 160 (72.63/32.82) LDALLTP.PPSLAH..PEPTLPT.DPerltEHMRLICINMHYLV.NELRPV --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AFYHRYTD 2) LDIFAKLRARA | 38 234 | 45 244 |
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