Description | ATP-dependent DNA helicase |
Sequence | MAASSSTEDLLQELLNVELELQDSLLDKQEKLYEKQSELKAVLESYQGLEKPDNDGAAPQAENWSGSFEWDDEADDIRFNIFGIPGYRANQQEIINAIMSRRDVLVIMAAGGGKSLCYQLPAVIRHGIALVVSPLLSLIQDQEDEKYIYKALEKGEGDLKVLYVTPEKVSKSKRFVSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPDVPLVALTATATKKVQLDLMAMLNIPKCIKFVSTVNRPNLFYMVREKSSVGKVVIDDIAEFIQSSYTNNESGIVYCFSRKECEQVAKELRERGVSADHYHADMDVNVREKVHMRWSSSKLQVIVGTVAFGMGINKPDVFKMVLYLILLTCMVLLYFTLFVIHHSLGKSMETYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDMVRYCQSKKECRRSAFFRHFAEPLQDCNGMCDNCAFSCEVKEIDASGHARAVVSLLQEIQEKDQRATMLQLVDKLKVKNKEVGFELKKDELEQLVIQLILHRVLKEEFSHTAYATNAYVTIGPLAKHVLHEKKIITLEVTSGERSSTGITKSSKRSRYSGLEVKLDNLRKELSSIHGGIFPHSILSTQQISMVCSQKPETTEQLEKIIGKLKTQKYGDRILEVIGKHEFDEEQGHQDSSSDKERQTSVNKSAKRSRNKKVVVIESSENED |
Length | 707 |
Position | Unknown |
Organism | Cynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Carduoideae> Cardueae> Carduinae> Cynara. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.366 |
Instability index | 46.78 |
Isoelectric point | 6.41 |
Molecular weight | 80102.80 |
Publications | PubMed=26786968 |
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro ATP binding GO:0005524 IEA:UniProtKB-KW hydrolase activity GO:0016787 IEA:UniProtKB-KW nucleic acid binding GO:0003676 IEA:InterPro |
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro DNA repair GO:0006281 IEA:InterPro DNA replication GO:0006260 IEA:InterPro |
Binary Interactions |
Repeats | >MDP06584 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 277.01| 93| 171| 260| 368| 1 --------------------------------------------------------------------------- 260- 368 (138.37/143.29) NLFYMVR....EKSSVGKVVIDDIAEFIQSSytnneSGIV.YC.FSrkeCEqvAKELRERGvsadHYHADMDV..NVREK...VHMRWSSSKLQVIVGTVAFGMgiNKPDVFKMVLYLIL 434- 537 (138.64/100.41) NLYDMVRycqsKKECRRSAFFRHFAEPLQDC.....NGMCdNCaFS...CE..VKEIDASG....HARAVVSLlqEIQEKdqrATMLQLVDKLKVKNKEVGFEL..KKDELEQLVIQLIL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 142.62| 43| 466| 166| 209| 2 --------------------------------------------------------------------------- 166- 209 (75.36/48.41) PEKVSKSKRFVSKLEKCHHAGRLsLIAIDEAHCCSQWGH.DFRPD 635- 678 (67.27/38.89) PETTEQLEKIIGKLKTQKYGDRI.LEVIGKHEFDEEQGHqDSSSD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 39.38| 11| 97| 584| 594| 4 --------------------------------------------------------------------------- 584- 594 (19.92/12.58) TGITKSSKRSR 683- 693 (19.46/12.14) TSVNKSAKRSR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 95.44| 27| 34| 369| 398| 5 --------------------------------------------------------------------------- 369- 398 (44.98/40.39) LTCMVLLYFTLFVIHHslgKSMETYYQESG 405- 431 (50.47/36.02) LPSECLLYFRPADVPR...QSSMVFYENSG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) DKERQTSVNKSAKRSRNKKVVVIESSENED 2) KHEFDEEQGHQD 3) KQEKLYEKQSE | 678 663 28 | 707 674 38 |
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