<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06538

Description "Concanavalin A-like lectin/glucanase, subgroup"
SequenceMWLPKSGSSLHGGGGGGDRLQRKGTAMVAVAIDKDKNSQHALKWTIEHLVTRGQTIVLIHVIRKPSAAGNYSVQCLDVILEDTSISKALTEYASYAAIEFLVLGASSKHGFLRFRSSDVPSHVMKAAPDFCTIYVISKGKISSAKKSSRSAPFPSPLREKIQQQSNHSFEASIRRKNSFNMQSLSFIIPVKLRSKFLKILCSVHDTTNLGRGLNPKLLCGELSESDTDISFVSSGRPSSDRMSSALRYDISSLDLSPTPRLSTSSDHSFGSMYYGTKGSDFGAMFSSSSIDSKRPSSARSGVIHIPSYAIRNFKTFATKRLSLKLNQDEVDDEMRRLKNELQRTMEMYSTACKDALTAKQKRLDDVRVAEEEAREIADKEKKRYQALMAKARASRRIAEIESEKRGLEQSEEKPTESNNVNLNQFKYRRYTIDEIEEATEFFTEARKIGEGGYGPVFKGRLDHTLVAIKVLRPDAAQGRSQFQQEVEVLSCMRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLLRRGNTPPLPWQIRFKISAEIATGILFLHQTKPEPIVHRDLKPGNILLDQNLVSKISDVGLARLLPASLTEDVTQYRMTSAAGTMCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPAMGLAHQVRRAINKGTFAEMLDPTVSDWPIDEALGFAKLSIQCAELRRKDRPDLGKVVLPELCRLRDLGEESMPSISAFGTGPCPSHSQTSIPLVSKASYPFRS
Length747
PositionTail
OrganismCynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Carduoideae> Cardueae> Carduinae> Cynara.
Aromaticity0.07
Grand average of hydropathy-0.357
Instability index50.49
Isoelectric point9.20
Molecular weight83001.12
Publications
PubMed=26786968

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
carbohydrate binding	GO:0030246	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06538
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      96.90|      21|      57|     230|     250|       1
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  230-  250 (36.38/18.93)	SFVSSGR..PSSDRMSSALR...YDI
  254-  276 (31.63/15.53)	DLSPTPRlsTSSDHSFGSMY...YGT
  288-  310 (28.88/13.57)	SSIDSKR..PSSAR.SGVIHipsYAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     468.75|     121|     484|       4|     130|       2
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    4-  130 (189.40/128.02)	PKSGSSLH...GGGGGGDRLQRKG.TAMVAVaidkdKNSQHALKWTIEHLVTR..GQTIVLIHVIRKPSAAGNYSVQCLDVILEDTSISKALTeYA..SYAAIEFLV...................LGASSKHGFLRFRSSDVPSHVMKAAPDF
  505-  616 (155.32/92.73)	PEYGCLVYeymANGSLEDRLLRRGnTPP..............LPWQIRFKISAeiATGILFLH.QTKPEPIVHRDLKPGNILLDQNLVSK.....I..SDVGLARL....................LPASLTEDVTQYRMTSAAGTMCYIDPEY
  618-  736 (124.02/72.59)	.......................Q.TGMLGV.....KSDVYSLGIMLLQLITA..KPAMGLAHQVRRAINKGTFA.EMLDPTVSDWPIDEALG.FAklSIQCAELRRkdrpdlgkvvlpelcrlrdLGEESMPSISAFGTGPCPSHSQTSIP..
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06538 with Med32 domain of Kingdom Viridiplantae
Unable to open file!