<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06534

Description "Concanavalin A-like lectin/glucanase, subgroup"
SequenceMNLSDSSPTIKIMIHTSSHENDGSLGMPNPPMNQVAVGIDDDKHSPHAVRYAIDNLMFNNSSILLVHVKVPRFNSHVSAGNGKYESSDFETQQLFNRFRTFCTLKQIPVTNVLLIDNDVPKAVVAYVRENKIENLVLGASTRSGIARKFKSSHVPYTIMKRVPDFCSVLVISKGKVVERRLATRTLVNLSAPPKLSTSSNLEEDRPAPMSGDHKNSPNTNRPQKSTGTVSTENIELPKGGKSPSALLGVEIPATVPFGSMDLIGHDLDFNLASNFNESRSSTSSSPSDIEADMRRLKLELKQTMEMYNEAYKEAIAAKKQASELHQFQMQDACRIEQARLSEEEAAKIVEMEKAKCKAAMEAAEKAKKLAEIEAKRRKHAELMAEKAKKQSNNHVFYRKYTIEEIEEATNNFEPLLKIGEGGYGPVFKGKLDHTPVAIKVLRPDAAQGEKQFQQEVEILSRLRHPNLVLLLGACPEYGCLVYEFMNYGSLEDRLLRKGNSPSIPWETRFRIAADIGTGLLFLHQDKPEPLVHRDLKPGNILLDCNYVCKIADIGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQQTGMLGVKSDIYALGVILLQIITARSPMGLTHQVGRAISKGTFADMLDPTVPDWPVEEALRFAKLALKCAELRKKDRPDLGSCILPELDRIKDLGMSSRLSKDDNHRPVPHSRDPSPRESSPYSYQSSLPAPLMGVLYKVTKQVSTISFSPPPPPSTIHHPPPPPLLISTFSKVLPCKLMEQLHTLAFCFLLVFIFAGVASSPTPDANLLCISECGTCPVICSPPPRPVESKPPPSPVTSKSPPLPTPVDSEPPPYLTPIYDATPPQSYSPPTPPPPPRPRTKSCPPPSYITMGTNAPPPPPKLVVVPSTQIPAGGGIGQKNYSYPYYYFYASKGVAFSLEFSGFLIVSFHIIFLFFG
Length945
PositionTail
OrganismCynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Carduoideae> Cardueae> Carduinae> Cynara.
Aromaticity0.07
Grand average of hydropathy-0.298
Instability index56.56
Isoelectric point8.49
Molecular weight104149.66
Publications
PubMed=26786968

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
carbohydrate binding	GO:0030246	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP06534
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     245.73|      48|      51|     786|     835|       1
---------------------------------------------------------------------------
  694-  737 (46.95/12.32)	...RP.VP.HSRDPSP..RE..S.SPysyqsSLP....................APlmgVLYKVTK........QVSTISF..S
  738-  810 (69.95/24.75)	PPPPP.STiHHPPPPPllIS..TFSK.....VLPcklmeqlhtlafcfllvfifAG...VASSPTPdaNLLCISECGTCPVICS
  811-  857 (96.99/32.19)	PPPRP.VE.SKPPPSP..VT..SKSP.....PLP....................TP...VDSEPPP..YLTPIYD.ATPPQSYS
  863-  889 (31.85/ 6.01)	PPPRPrTK.SCPPPSY..ITmgTNAP.....P.P....................PP............................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     105.49|      19|      20|     350|     368|       2
---------------------------------------------------------------------------
  297-  312 (20.05/10.78)	...KLELK..QTMEMYNEAYK
  328-  347 (23.79/14.02)	QMQDA.CRieQARLSEEEAAK
  350-  368 (32.46/21.53)	EMEKAKCK..AAMEAAEKAKK
  371-  389 (29.18/18.69)	EIEAKRRK..HAELMAEKAKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     322.76|      85|      91|     116|     204|       3
---------------------------------------------------------------------------
   58-  107 (64.45/35.08)	.................................FNNSSILLVHVK.VPRFNSHVSAGNGKYESSDFETQQLFN.....RFRTFCTLKQI
  116-  204 (129.97/89.49)	DNDVPKAvvayVRENKIENLVLGASTRSGIARKFKSSHVPYTIMKRVPDFCSVLVISKGKVVERRLATRTLVNLSAPPKLSTSSNLEED
  213-  292 (128.35/79.72)	HKNSPNT....NRPQKSTGTVSTENIELPKGGKSPSALLGVEIPATVP.FGSMDLI..GHDLDFNLASN..FNESRSSTSSSPSDIEAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.22|      13|      35|     513|     531|       6
---------------------------------------------------------------------------
  513-  531 (14.90/22.07)	ADIGTGLLFlhqdkPePLV
  551-  563 (24.32/12.34)	ADIGLARLV.....P.PSV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP06534 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PPKLSTSSNLEEDRPAPMSGDHKNSPNTNRPQKSTGTVSTENIELPKGGKSP
192
243










Molecular Recognition Features






MoRF SequenceStartStop




NANANA