<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06468
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGDFPPPERTSVKASELVHRAVDKSYEDFRTLIHQLPTMREEERREPLLAHLQSSRKRFAQLLAVLKWSVQSPLLQQCDTLLQQTETYRNNVNETNDRLFFMHADLNRAKERRYDLSTAADVLYGGSYLRLPTIIKNAMFPRELPEVDTEQAATEVADIIRFRLIEADIPEQFSNIKLEGGFVTCQAEGEFEIVLTIQGKEKDAKWRVISVNTALTDAQAFEDHSQAASTSALRIIRSNAPNAAHYNHLKNLVQRAMNKSEKPFVDAFMVMREFCSSLALQILASQGKLLMEGRWKNRIMIKHLRDQNILDICYWPKACVRKEAQALTEQQRLIQQLSDPIATARRGSALPYPESSLCVRLGFDPNKKKLLSVSLSPSLPPNLPGYASLLSALEVPSNMFLLSAENLLIAAMRAHVSAALFSIGRLLVVDSPDDKASTQLVSGEDVAMVCSDTSLRIARADIGGLQQFLEVTFDIREGRFIVSSVAAARQSALYITVKQLERILNTQCKIELGGNVDKSFPNDFALVSGDGKGDKSNELIHTSVRKVLCEIVADEVAQIGSSFKGIEVLRSVNLNWERYLAFRQQHGGQTEDLSISDTALYFQLTSSKESTCYLVIEIDKYGEVDGMNGNVHEAAEAEEYIRLPCFSLLQTSAGLPGQPSGVQFIQRFGAFKKEDLHPSVTRHNEIIGNSLRGNSRKRPYSSNGTSLVGRNMRTTKKALLDGGRVQESTGYWLDDAEHQAVSRNFVPHIASVLLHAINMCSERIQLQHFVNFARRRKSRIRYSGEAGTANREGTGGQVVTLSFPEKVNTDPLKIVAIQGHLKHGGGFELCLQLASPPFKFISPKKPKDHLLSERSHYVNERGQLIFRYPTTMVTSELFSENPLEMFMVELICVVRPLCELAVKLEKMLTAVGRYTNDIKDDGHFYVESADPFAIVLACRAPNPRHCIAAGSSPDGLTTYRVTVQFKQKMGFVVNYSHKAEHPLMHFIQSALNGHSDPAQFVEALERTCVPMGILASVVESQLLCAKYYRQDPPPNAKDGAANGGPKAFGRGKMGGKGMKLGYKFKLPGEEKGYYAEKSIGGDDKSFVPAELVMIPRSQTQVRLSYGDRCAVDIYFLENHSVKMQSSSGGVRVPSCPSEKGIVVDCQNFAEKLRSTLSEMASA |
Length | 1162 |
Position | Tail |
Organism | Phytophthora nicotianae (Buckeye rot agent) |
Kingdom | Oomycetes |
Lineage | Eukaryota> Sar> Stramenopiles> Oomycota> Peronosporales> Peronosporaceae>
Phytophthora.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.277 |
Instability index | 40.10 |
Isoelectric point | 8.35 |
Molecular weight | 129344.41 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06468
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 452.17| 183| 595| 174| 421| 1
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32- 311 (241.40/208.95) LIHQLPTMREEERREPLLAHLQSS...RKRF....AQLLAV.LKWSVqSPLLQQCDTLLQQTETYRNnvnetndrLFFMHADLNRAKERRYDLSTAadvLY...................................................................................................................................................................................................................................................................................................................ggsylrlptiiknamfprelpevdteqaatevadiirfrlieadipeqfSNIKLEGGFVTCQAEGEFEIVLTIQGKEKdakwrvisVNTALTDAQAFEDHSQAASTSALRIIRSNAP.....NAAHYNHLknLVQRAMNKSEKpfvdafmvmrefcsslalqilasqGKLLMegRWKNRIMIKHLRDQNILD
333- 421 (76.87/81.08) LIQQLSDPIATARRGSALPYPESSlcvRLGFdpnkKKLLSVsLSPSL.PPNLPGYASLLSALEVPSN........MFLLSAENLLIAAMRAHVSAA...LF...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
778- 884 (133.90/72.97) .....................................................................................................sigrllvvdspddkastqlvsgedvamvcsdtslriaradigglqqflevtfdiregrfivssvaaarqsalyitvkqlerilntqckielggnvdksfpndfalvsgdgkgdksnelihtsvrkvlceivadevaqigssfkgievlrsvnlnwerylafrqqhggqtedlsisdtalyfqltsskestcylvieidkygevdgmngnvheaaeaeeyirlpcfsllqtsaglpgqpsgvqfiqrfgafkkedlhpsvtrhneiignslrgnsrkrpyssngtslvgrnmrttkkalldggrvqestgywlddaehqavsrnfvphiasvllhainmcseriqlqhfvnfarrrkSRIRYSGEAGTANREGTGGQVVTLSFPEK........VNTDPLKIVAIQGHLKHGGGFELCLQLASPPfkfisPKKPKDHL..LSERSHYVNER........................GQLIF..RYPTTMVTSELFSENPLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 113.36| 35| 594| 430| 520| 2
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433- 470 (54.59/108.15) DDKAstqLVSGEDVAMVCSDTSLRIARADIGGLQ.QFLE
1082- 1117 (58.76/13.86) DDKS...FVPAELVMIPRSQTQVRLSYGDRCAVDiYFLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 143.32| 43| 345| 689| 738| 6
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689- 738 (65.63/54.65) NSLRGNSRKRPYSSNGTSLVGRNMRTTKKALLDGgrvqESTGYWlddAEH
1035- 1077 (77.69/46.54) NAKDGAANGGPKAFGRGKMGGKGMKLGYKFKLPG....EEKGYY...AEK
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