<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06421
Description |
Coiled-coil domain-containing protein 47 |
Sequence | MMESRDVLYATPYRPKSSAAHVFESIKPTPLLNITPECSEDDDSNSGTSEKSSDKTLKREIADSSLHSCYHGKQLNRPFLNTCEAIIEKIKRVKKIDPSTLAKEQIRRNEHYYQKIAMKKENARSIVQNIKSIQSSISEVLAKLQMVDQPSLLNSFRVISSQFNSMLQLLRSDRASHFKNYVFLPIKLSVEVDADLEAATENRLHAWTHAVVPDYLRTKPDPQVEQKDQQISNQVQQRICNPESLQKQITAFNRCLNCILDSLNASIRDSEMDGRKTSKTSDGEDTALLVAAILKGQNVKPAYSATPASSRGSSGDSGHSKASKAQQVQCCFILKKQCMAKNKCSININQFTTERRKTCIWMFFLSCLFEFVELSVKQVSQIDDNEFAEFEEFDVELDASVDADFTANNVNERETPPVDTASIGAKRSPAYAEQKRNDAPNNNFNDDDYGIVEDESVDDFSHLLDENEFENFPDERRPGKQNAGPSKTVTQLKITDTKNHSLAVAWFDSNRPFLEENFSIVGDDGISPEVTKNVLIKESDNHYIVWCSGRQGCIGMEIHLKLIKRQDLLSLIFYIIRPKFDVIEIKIILNPEEMDPFVFALGTKRSAIKNSKEIMDLNLYCSEKKNVEKLGLPSSYILHSEIGEVTTGLIDTKIVSALCKYKDVVDYIHISDQFVGIKPIEMENMTKPPETAKVVMICLNIPGQLRATEEDVSSLQPLMIFIFHVLEKVRRFRLTREGKQKADKNRQYVEESFLKTTHAQRQEAAQQRREERARERKERLMAEEDPERQRKLEKQELKRELKKKQPRVKQIKIKAMLRFLIKAKQIHC |
Length | 828 |
Position | Head |
Organism | Trichinella sp. T8 |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella> unclassified Trichinella.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.584 |
Instability index | 48.76 |
Isoelectric point | 7.49 |
Molecular weight | 94665.79 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
rough endoplasmic reticulum membrane GO:0030867 IEA:UniProtKB-SubCell
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP06421
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 65.98| 21| 38| 86| 106| 1
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86- 106 (33.18/21.74) IIEKIKRVKKIDPSTLAKEQI
126- 146 (32.80/21.41) IVQNIKSIQSSISEVLAKLQM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.45| 37| 38| 455| 491| 2
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455- 491 (65.10/44.46) ESVDDFSHLLDENEFE.NFP..DERRPGKQNAGPSKTVTQ
493- 532 (55.34/36.64) KITDTKNHSLAVAWFDsNRPflEENFSIVGDDGISPEVTK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 176.91| 55| 206| 178| 234| 3
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178- 234 (88.77/66.86) FKNYVFLPIKLSVEVDADLEAATENRLHawTHAVVPDYLRTKPDPQ.VEQKDQQISNQ
387- 442 (88.14/58.82) FAEFEEFDVELDASVDADFTANNVNERE..TPPVDTASIGAKRSPAyAEQKRNDAPNN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 138.20| 36| 36| 624| 659| 5
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601- 621 (26.59/13.47) ......LGTKRSAIKNSK...EI....MDLNL...YC
624- 659 (57.34/36.82) KKNVEKLGLPSSYILHSEI.GEVTTGLIDTKIVSALC
662- 698 (54.27/34.48) KDVVDYIHISDQFVGIKPIeMENMTKPPETAKVVMIC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.75| 27| 270| 24| 52| 7
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24- 52 (42.65/35.22) ESIKPTplLNITPECSEDDDSNSGTSEKS
297- 323 (47.10/31.48) QNVKPA..YSATPASSRGSSGDSGHSKAS
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