<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06405
Description |
RNA polymerase II-associated protein 3 |
Sequence | MAKLMKENFPPDRERVVTKTSELQITLIPTHNKKSASLILCLSTELDCLRILQLTVVMQSFIFIEFHDKNSNEAPQRIEELIGELQQLRKDIRLCFRGVDCSPEEQVHRVRVLYKELLLKDRLVKHLKQISVQLVNVQVNDSKLLNEEVFKIPDLLDVGPSTEKASSSNNNNGKKLSLSCPKCSCIILRENHGEQVTVEKELPELSLKADGTVDMKTFTEFVRVDDIYDFENIGFSRDSNGVQYLLCAACEIGPLVMLVRKERKDISEKDAQKALFEKESGNSFYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTYVKALYRRGMASKGLNNFDDAVEDFQHVLTLDPNNDIAKKELEEIISKVKPAENDPLLVYPVENPDEKEYQKPLKVIIVRDAVKKSHFNSQQPALSDESNVTKQSEQKISDYKLNASIKITRIPKCYAELRADWISIKEEPLALADYILNIPCDCFSNLLGEFLDGEFVANLLKAFMIKVNSEPQCSISCMERLELIGKAKRFDIVVLFLSHLKTVLDKAKHVCSKDQVQRWDDLFKKHIETAINKNDNEEEASVESFPKFYPTRPEQVPSGSKNISTMV |
Length | 620 |
Position | Middle |
Organism | Trichinella sp. T8 |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella> unclassified Trichinella.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.370 |
Instability index | 41.83 |
Isoelectric point | 6.07 |
Molecular weight | 70801.66 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | guanyl-nucleotide exchange factor activity GO:0005085 IEA:UniProtKB-KW
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GO - Biological Process | protein transport GO:0015031 IEA:UniProtKB-KW
small GTPase mediated signal transduction GO:0007264 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06405
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.24| 31| 32| 285| 316| 1
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285- 316 (52.70/49.62) YVK.KDYEKAIMCYSRSISAD.PFRPVVYcNRAM
318- 350 (46.54/36.43) YLKlKNYAEAYADCSKALTFDsTYVKALY.RRGM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 480.53| 160| 423| 6| 182| 2
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6- 182 (237.25/228.55) KENFPPDR.....ERVVTKTSELQITLIPTHNK.KSASLILCLStEL..DCLRILQLTVVMQSFIFIEFHDKNSNEAPQRIE.ELIGELqqlrkdIRLCFRGVDCSPEEQVHRVRVLykELLLK....DRLV...KHLKQIsvqLVNVQVNDSKllnEEVFKIPDLLDvgPSTEKASSSNNNNGKKLSLSCPK
425- 600 (243.29/184.82) KSHFNSQQpalsdESNVTKQSEQKISDYKLNASiKITRIPKCYA.ELraDWISIKEEPLALADYILNIPCDCFSNLLGEFLDgEFVANL......LKAFMIKVNSEPQCSISCMERL..ELIGKakrfDIVVlflSHLKTV...LDKAKHVCSK...DQVQRWDDLFK..KHIETAINKNDNEEEASVESFPK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.55| 19| 31| 372| 390| 5
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372- 390 (30.97/16.03) DPNNDIAKKELEEIISK..VK
404- 424 (27.58/13.62) NPDEKEYQKPLKVIIVRdaVK
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