<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06396
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MARRQFPNSKSDWLVMTPSHASANKIKEASILIMRNLFVTKIHSFLQFSTFIFLFSALRLIFAMNSGDAEDEEEQKLLVAVEPLREWKVFDISFSGVERYLQPLHYNDHVAELAHNVRWSKLVGKSSRNLSTISSTTKADDPTSSRAAWENVARSLHSALTEMVVLMDLIKVTMTGRYMAFDAAMHEMSDDSKPMFKSGDAYALFAKRKALSITSNVLLDFVGKQKVKLSGIGSIQQAMQPDEESTYLREMAEMRKYWRLRKSKNSILGDLSLGHCTFVCLCMVSCLHLLLYVCMLESGCRRFERKSTVEDTFNNWQAFPQVGSVYTSGRFEFNSVGIDIQADRHLEGQVGSGSVIDAVSRFVFIGIRQFYANQAQAISKEAIVYHNNTSFIYKDFIMIRLDSSNAVLVSLFSREELEEARKNMPKDKSAKRLIAETKLQCIFALKQRVCSRYMYLIDMVGNFVSTKPITAPLIIQTHPAPLAGVEMKSQEQIEHLEECQPSFILHNILDDARHYILITEMKKALDQLSSAQKDPVMTVYWCYDCCRYNTIARLSLVIPFYEYCGSLLRILYPLDSDQVQVFLLKIDGENPSWDNWQNCTPDAYVPIDLNSMAVDGVSPRTTMHFTFRLFVNNIHILFAQFCVVAKVQIKSWCL |
Length | 654 |
Position | Head |
Organism | Trichinella sp. T8 |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella> unclassified Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.066 |
Instability index | 45.00 |
Isoelectric point | 7.83 |
Molecular weight | 74680.49 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06396
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.98| 25| 27| 298| 324| 1
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298- 324 (42.67/37.86) SGcrRFERKSTVEDTFNNWQAFPQVGS
328- 352 (45.31/31.68) SG..RFEFNSVGIDIQADRHLEGQVGS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 180.73| 55| 282| 232| 292| 3
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232- 292 (80.31/59.81) IGSIQQAMqpDEESTYLREMAeMRKYWRLRKSKNSILGDLSLGhCTFVCLCmvSCLHLLLY
518- 572 (100.41/53.52) ITEMKKAL..DQLSSAQKDPV.MTVYWCYDCCRYNTIARLSLV.IPFYEYC..GSLLRILY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.53| 12| 590| 37| 48| 6
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37- 48 (23.26/14.00) LFVTKIH.SFLQF
629- 641 (19.27/10.49) LFVNNIHiLFAQF
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