Description | Mediator of RNA polymerase II transcription subunit 12-like protein |
Sequence | MASCTVAWEKKPLKRPRLGQPDVYPQDPKQSEANYDDRFISSNFINDELTAEKVRQGFIYKPPLLNEYESLRSQRFDENLEDYFIKLTQSYNAIVNKKAEINALQDSYKKKSGFKEPSIWHFFIAPLAAKPKGQDTWFKDLSGNKPLSALGKRFPFLNKKDEILYTLAEFNVPMVRVVWFLKMTNAHIAQQQECGKMKKKHMSDPFADWTHLVMKYLRDLCSKLGEFFSLNLEVPMNSEFECHYRHWQYTTKLTRHLFEEGLLDKEMLLNGLLDIFAEKIYASSFGILKMLVPVLLQFIDGFVMSVLLSRRLVYLACKVLSAMKIDNLQNNSENMKEEDEEEEGTLDYLNCPFHRTVLFGLSNVIHAVLIDCPTALIWNEMECEDTGENGKAYLCGSPLDLLHCSPVDLPLFMDPSTEFVKKELERLTEMVTERSRAVESHWSYNKCQHSGLSESTIIQHFLSILDCLDKFKFEYVNETNNIDTLYKTIFQSEKKEMRVDVDSIAVQFLCHWAVSPHRYGSYRAAVVTRLFERHLQEVKHDEFQLSKKMPQVRHPFQKSLFNYLHNQAPNLGEMCSSSEIKPFTNLILLFSRLIESDIFSHDQYVSTLVSSGDLIPNGANIFYPLQNQCSSAAVENVSNTQPAVLMSSNFFSEQFKPIEVSNVDFNYFKDSDESKLDFDRIIDFADKKAMSSDTDSCSSKRVPKLSKHYFNVLHFPVPQDDQYRHECNQRQLLLFGSNSDQYSRKHILKKLTKELNKLWSKKTSAELTTTGLIRVRKIIDSESLCSLSRKIQNLVFYDQFAVMDCCCDAGIAQFNSFISGQSNCLPTLENFDFLLGLLEESSNFISLVEFVEAIICLLPKLEAQIVERNFQCANSLTLQYAVCMVGYMRKHHCYFIQLESVMCNIWRSLLLYVKSKTVVNSFSAERCVWVYLHDLYQCCSYIRSLHADLYLNSRDCIQRCLCVETKPSCCNDLRTLLADVSQDIMLDVLFQESDLVIEPNLIQRLVENANLCYAFAIVAVKALCGLSGDTERLFNLVLFCADVTALCPNLNADWLAVFKILCCPFNSSQDQSSCDSLLNIDVSDHQCYQPLTVLVITLISRMCIRLEDFILHVAMPSLLPLWKHAGSAKVEKGSEASAKLTLHLLGKILLFFDYQGPKNALPAKTKGELSLICSSVDGMVPDAILTLLIAILMLDDSKVQELKSKENFDTKRSAAKQFVEEDTNTAGNSDIGSTAIQLLELICRQEWTKRKFLHSTDLFDPKRLLNPLVNQTQAQRLLRMITRSDSEILLKKFDSCTTKKELISKVLDSLTIMNLWVSQMDLQLLLKQVANSQSESLHLVDTIAKSCMEVFQPQATLAFGEPSDDKDENAYLNASSFDEIAPYWLVAPLISRLPSFVQGRVLKAAVSILENCQARRDRNLFVQSSSLLAHQPFLSLVLICLRGQDDQREGLLSSLLKQIQEFVMRVKEDPYILCDRDIVSEMLDALQLRLSLIGGMFDTVCRNANLENWSLVMVQLLLYGIVTEEKNQALFYTCVDILCVLLLSCLLPDSAGFSFSGQERTNEDCKRIYNNVIKKLKVKEIGDRQVPSLRCVHQLLPIPRQMVDIIVCDEYGSQPQKGSRGGFSSSEVTQRKGLQIIGKEKLNPWEIIEGYNRENIGLKWSWFQGIRLDYQPETLFEQMMRMLPHDHHHAFNRPPMPGEPRSDPFLETLQVHYLPCTNETSDSDKLTTERLKSNGPVAISGGTLVSEFSDQVQSPRTTKARARKSTRGRKTSSRVTVSSNVALSSVPPMVQNRQLGIGQPTLTAHYGYYPQQVAMTGGPSGAVPPYGQGQMWSIGNVQSASTAVPPTQYQSRNFTGAQMTPVQSSSGKQAISAMIRGRRPSGSGGQQMMTTAHIQAAPLATGQPYHQQQLHSIGQVDPMVAPMHQVQMQMDARQQLMQESMMEQQQIRTPGPRSMATQQHCLPQVNSAASQPVMHGNYSNYPGQHGGGRMQMTSGRNQYAAQQPAQPPFNCSPNYNAQFYQAQNAGQMRMSQTDVIGQSNVRYTQQPNAIGSSYQMQSQQTLRAPAGYVAQQANPMYAAPNTPQYQAAQQQNVSMYPVSRMSQYSSNVPGQEMNASQQQINYYPPQY |
Length | 2127 |
Position | Kinase |
Organism | Trichinella sp. T8 |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia> Trichinellida> Trichinellidae> Trichinella> unclassified Trichinella. |
Aromaticity | 0.09 |
Grand average of hydropathy | -0.280 |
Instability index | 48.68 |
Isoelectric point | 6.47 |
Molecular weight | 241268.76 |
Publications |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP06383 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 8| 221.68| 25| 35| 1968| 1992| 1 --------------------------------------------------------------------------- 1815- 1832 (21.03/ 7.18) .......MTG.GPS.GA...VPP....YGQGQM..W 1840- 1864 (22.30/ 8.11) ASTAvPPTQY.QSR.NF...TGA....QMTP.VQ.S 1865- 1889 (22.04/ 7.92) SSGK.QAISAmIRG.RR...PSG....SGGQQM..M 1896- 1919 (29.20/13.18) AA...PLATG.QPY.HQ...QQL....HSIGQVDpM 1931- 1955 (30.78/14.34) DARQ.QLMQE.SMM.EQ...QQI....RTPGPRS.M 1968- 1992 (46.80/26.09) AASQ.PVMHG.NYS.NY...PGQ....HGGGRMQ.M 2000- 2030 (26.15/10.94) AAQQ.PAQPPfNCSpNY...NAQfyqaQNAGQMR.M 2043- 2068 (23.38/ 8.91) YTQQ.PNAIG...S.SYqmqSQQ....TLRAPAG.Y --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 305.15| 71| 86| 588| 658| 2 --------------------------------------------------------------------------- 555- 583 (33.35/16.65) ..............................PFQKSLFNYLHNQAPNLGE................................MCS........SSEI..KPF 588- 658 (123.47/86.63) LLFSRLIESDIFSHDQYVS..TLVSSGDLIPNGANIFYPLQNQCSSAAVENVS.....................NTQPAVLMSSNF.....FSEQF..KPI 676- 747 (55.11/33.54) LDFDRIID...FADKKAMSsdT...................DSCSSKRVPKLSkhyfnvlhfpvpqddqyrhecNQRQLLLFGSN.......SDQYsrKHI 785- 852 (93.22/63.14) CSLSRKIQNLVF.YDQF.A..VMDCCCDAGIAQFNSFISGQSNC.LPTLENFD.....................FLLGLLEESSNFislveFVE....... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 173.42| 52| 82| 26| 78| 3 --------------------------------------------------------------------------- 26- 78 (86.03/60.99) QDPKQSEANYDDRFISSNFINdELTAEKVRQGFIYKPPLLNEYESLRSQRF......DE 105- 162 (87.39/57.21) QDSYKKKSGFKEPSIWHFFIA.PLAAKPKGQDTWFKDLSGNKPLSALGKRFpflnkkDE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 130.02| 27| 28| 938| 964| 4 --------------------------------------------------------------------------- 903- 931 (34.28/21.28) .CNIWRSLL..LYVKSKTVVnsfsaERCVWVY 938- 964 (53.79/38.31) CCSYIRSLHADLYLNSRDCI.....QRCLCVE 969- 992 (41.95/27.97) CCNDLRTLLADV...SQDIM.....LDVLFQE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 165.25| 53| 67| 1535| 1590| 5 --------------------------------------------------------------------------- 1535- 1590 (83.72/62.70) VDIL.CVLLLSCLLPDSAGfSFSGQERTNEDCKRIYNNviKKLKVKEI..G.DRQVPSLR 1603- 1659 (81.53/50.58) VDIIvCDEYGSQPQKGSRG.GFSSSEVTQRKGLQIIGK..EKLNPWEIieGyNRENIGLK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 342.87| 103| 191| 163| 276| 6 --------------------------------------------------------------------------- 171- 276 (175.59/143.46) NVpmVRVVwFLKMTNAHIAQQQEC...GKMKKKHMSDPFADWTHLVMKYLRDLCSKLGEFFSLNLE..VPMNSE.FECHYRHWQYTTKLTRHLFEEGLLDKEMLLNGLLDIF 363- 471 (167.27/108.46) NV..IHAV.LIDCPTALIWNEMECedtGENGKAYLCGSPLDLLHCSPVDLPLFMDPSTEFVKKELErlTEMVTErSRAVESHWSYNKCQHSGLSESTIIQHFLSILDCLDKF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 69.73| 20| 26| 2077| 2097| 7 --------------------------------------------------------------------------- 2077- 2097 (35.58/31.34) YAApNTP.QYQAAQQQNVSMYP 2104- 2124 (34.14/23.27) YSS.NVPgQEMNASQQQINYYP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 102.60| 36| 44| 1114| 1153| 8 --------------------------------------------------------------------------- 1114- 1153 (46.85/54.45) AMPSLLPLwKHAGS.....AKVEkGSEASAKLTlhLLGKILLFFD 1156- 1196 (55.75/41.66) GPKNALPA.KTKGElslicSSVD.GMVPDAILT..LLIAILMLDD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 36.98| 12| 35| 1281| 1292| 9 --------------------------------------------------------------------------- 1281- 1292 (18.79/10.67) ITRSDSEILLKK 1317- 1328 (18.19/10.06) VSQMDLQLLLKQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 117.10| 28| 30| 1406| 1433| 11 --------------------------------------------------------------------------- 1366- 1383 (19.30/ 7.28) ..........................KDENAYLNASSFDEI.APY 1406- 1433 (48.71/30.57) VS.ILENC...QAR............RDRNLFVQSSSLLAH.QPF 1434- 1462 (28.84/14.84) LS.LVLIClrgQDD............QREGLL...SSLLKQiQEF 1479- 1515 (20.25/ 8.03) VSeMLDAL...QLRlsliggmfdtvcRNANL..ENWSLVMV.Q.. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 108.19| 28| 36| 1725| 1753| 17 --------------------------------------------------------------------------- 1692- 1710 (25.18/10.93) .........NRP.PMPGEPRSDPFLETLQ 1725- 1753 (40.65/27.12) KLTTERlKSNGPVAISGGTLVSEFSDQVQ 1764- 1791 (42.35/23.98) KSTRGR.KTSSRVTVSSNVALSSVPPMVQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 59.46| 12| 36| 1201| 1212| 18 --------------------------------------------------------------------------- 1201- 1212 (19.47/ 9.86) ELKSKENFDTKR 1240- 1251 (19.24/ 9.65) ELICRQEWTKRK 1252- 1263 (20.75/10.99) FLHSTDLFDPKR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) MASCTVAWEKKPLKRPRLGQ 2) YYPPQY | 1 2122 | 20 2127 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab