<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06356
Description |
Mediator of RNA polymerase II transcription subunit 23 |
Sequence | MFYCITGFYSFIVMSLSLSDFETKVKNLFKEHAKSGIAYFFFRPYLMTSSEECEKKIIILTANELVEIFTSVPQNLQESAFSIVISHRVLSNSANKIVDFFVRDVTQRQILSIKCICEKLLTCAELNINSCGWNDTFAFFMENISLLDYKGVRDTLKRLLDIPIPVHLQVDQRKSVEAVEKLIKTICDRKNNLLPAYFVITEIIKNLPEQRCFSHWRMADCFTEIIESFRPLAQLNSVCGRTFMTPIPGHVGFYFNAFWKLEALSLRFPLKGLLPYSQDLLNPQMRLLTHVFMHYTYRDAIAVLLGTAKPEKSRIPYFEEVITEIILELMFTAECDHSQLNPQAWRIISTQIIYLTLQQSICFTRLVKILHTKLTHYPYRYARNQLMWCLFNFLSGGMQKYSVEEFAVILDLYRLLYTGRDIFTVSGSDSSCVLMLAPTCIWIHILKKSPSMEVELPPTVNTQRKFLQEALKNKTQFNTDNYMVAFFCIKLDQKNLKFSDSSTSEIFQQDLLPILLENLDNARGHNSTQASGNFASNATTNSMSYPNGTVSEVKLRPLKLEFLDSVSVHVRMNIANSLIGTFGRFMQGKSAWPSPALVETYCRMLTYADLEILGLKQFTSHIVLTAARHQCCEMMYICCEILNYRLFNIPSTYRVHAIVTLQQTLAFAKFQTNASLYWMLERTLLLQFQWYPHYEIFQAPFARLLNSFVAVAADGTRQSIAENEELMRIIILTLARSTVISSNSDSCFIEGVYRELLNKLPSYSWPQSTLSVFPQVFCSHYTQQQQQQQQQQQQQQQQQQQQQQPQQQQQPQPQQSNIVGSSQQQQQQQQQQQQQQQSHFLLKQQVDEEYIKHRTFGSELSLIDYFTNTSTSTVYLCLLWRLVYDTGELPAVSMKILEVLGPRKVLIHLKSLADFLVYETNSADVNRCVDVLNRLIFKYAVVPLERFMLTMLLRDYEGNDAFYALLIVMLLVQRSEELRSAVADCVAMLPSDYWHCQDWNDKYQAYQLKHAERTWSQVHTELSRASLTPNDCPLPVYFGTRCLQMLPVVDLLLQKLVESPAACLKFLDSTLSILGPLYRFHPYPVSFLYSTFRFYEKRLVEAPAIKQKLALAVHGACVPSRDDHWLLSAEFVSCVGSGPVTDRGPWVPDLNYYAALVRRLMDTFSEPRQQWSRKSDLRFVEFNNFQTHALYCICIELMSLSVSVVDVGNALITLVTHWHSLVDKNTVMYWVNAIGLIFSALPISYMEPFYQTILTTLCSDHMNSMNTDVSNKLDFEKRSKLMEDCYPARILALCHAVWLHSASGYLQLLPQALRSTWIPHVRSEGQFLYVCHLVAPFLQRFYQERTKFTMDITTDLYQMLYNVDCEVSSWKYEDLICDFFYHVKYMYVGDSVRQETDRIIPMLRTSLQQKLRYISFAQGEQSGTPFSGLLILKLKSNLFYEFILLDRFYTCRRSWYSFGVAVFQKLWKIEFYSYFYAHRNDQSDKIVGNSDGCMASTIAHIWRNGAAFLARGDQTGRSGNDIFSLLSSFVSIFWHRGSGYGYCWCFQILLDDRPYWWVHTAGVSGQLSHPLKQFQWTCETGPGSPSGHAMVSASVWFNLLYNLQSDLVLGDLSGCLCWLLYVVFLIAVSISRTYIRICIALVTRSLVGHRRRRWSNLIAFMIALLLIALSVHEAHRFLGVDTHRSIELAAKYCHRAEWIHQSTTPLASFFRDVGVLISIAMLLANKSMHTNNNNNNITSKPFSSKFAQALLGVGLNQLVALIPIGRLPIALFYAVLLPIVSICCFVVNMVLDLDNFRVEKGGNVQAVRISQQKRFQSVDLVDQVVETDQEWRRSRYLSDEWNRLKNLCSKEIGEKIKRKEPVHGDSTLPDSLTDKLQKVTVDQIRALSVSQIKQLRLLIDHEMEKSDKLVENLEAVRFKALSQIGNLVHNSVPVSENEDDNEIVRTWGELEVRKKYSQVDLGIMVDGYDSERGCSVAGSRGYFLKGPLVFLEQALIQLAMHMLYKKKYTPLYTPFFMRKEVMQEVAQLSDFDDQLYKVIGKSSEVKEDIAEEEKYLIATSEQPIAAYHRDEWISKESLPLRYIGFSTCFRQEVGSHGRDTSGIFRVHQFEKVEQFCITSPHDDASWEMLEEMILNAEMFYQTLNIPYRVVSIVSGELNNAAAKKYDLEAWFPGSGAFRELVSCSNCTDYQSRRLRIRYEFVHMLNGTMCATTRTICAILENFQEENGIVVPEALRPYMPDDYKDFIPFVKAAPKVDQQAAKRGNKSATEKSTHYVRSNSKYAQEFCRTLFVCSLSLNVAHQSGAIGCLGWFLEFCIILPRTFTACTILAVDRYGPVDRFLCLNLLLQSRTRFYKFAAVVNLRRCGCRQIFLLRTCKPAFSGQWFTLATAGNATVVDS |
Length | 2397 |
Position | Tail |
Organism | Trichinella papuae |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.12 |
Grand average of hydropathy | -0.063 |
Instability index | 46.41 |
Isoelectric point | 7.97 |
Molecular weight | 275952.17 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-KW
serine-tRNA ligase activity GO:0004828 IEA:UniProtKB-EC
|
GO - Biological Process | seryl-tRNA aminoacylation GO:0006434 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06356
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.57| 34| 34| 774| 807| 1
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766- 804 (64.03/38.50) PQStlsvfPQVFCSHYTQQQQQQQQQQQQQQQQQQQ....QQQ
805- 845 (56.54/33.15) PQQ..qqqPQPQQSNIVGSSQQQQQQQQQQQQQQQShfllKQQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.96| 29| 119| 177| 207| 2
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177- 207 (42.76/38.32) EAVEKLIKTICDRKNNlLPaYF..VITEIIKNL
299- 329 (45.20/30.34) DAIAVLLGTAKPEKSR.IP.YFeeVITEIILEL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 114.66| 32| 67| 1368| 1399| 3
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1368- 1399 (60.65/36.10) SSWKYEDLICDFFYHVK..YMYVGDSVRQETDRI
1436- 1469 (54.01/31.29) SNLFYEFILLDRFYTCRrsWYSFGVAVFQKLWKI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.21| 17| 17| 1553| 1569| 4
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1553- 1569 (33.34/19.62) RPYWWVHTAGVSGQLSH
1572- 1588 (33.88/20.07) KQFQWTCETGPGSPSGH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.41| 24| 657| 1160| 1186| 5
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1160- 1186 (37.34/35.83) LMDTFSEPRQQWsRKSdlRFV..EFNNFQ
1820- 1845 (40.08/25.80) LVDQVVETDQEW.RRS..RYLsdEWNRLK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 126.74| 40| 538| 1725| 1796| 6
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1674- 1723 (59.35/56.06) AHRFLGVDTHRSIELaakychraewIHQSTTPLASFFRDVGVLISIAMLL
1747- 1786 (67.39/40.54) AQALLGVGLNQLVAL..........IPIGRLPIALFYAVLLPIVSICCFV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 179.97| 59| 171| 878| 943| 9
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878- 943 (90.67/74.60) LLWRLVydtgELPAVSMKILE....VLGPrkvLIHLKSLADFLVYETNSADVNRCVD...VLNRLIFKY..AVVP
1052- 1119 (89.30/56.12) LLQKLV....ESPAACLKFLDstlsILGP...LYRFHPYPVSFLYSTFRFYEKRLVEapaIKQKLALAVhgACVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.08| 16| 120| 1472| 1494| 13
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1472- 1489 (22.54/29.70) YSYFYAhRNDQSDKiVGN
1505- 1520 (28.54/10.57) GAAFLA.RGDQTGR.SGN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.12| 40| 941| 375| 417| 14
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375- 417 (71.16/49.83) THYPYRYARNQLMW.C..LFNFLSGGMQ...KYSVEefaVILDLYRLLY
1316- 1361 (62.96/36.51) TWIPHVRSEGQFLYvChlVAPFLQRFYQertKFTMD...ITTDLYQMLY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.28| 15| 17| 947| 961| 15
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947- 961 (27.35/21.19) FMLTMLL..RDYEGNDA
965- 981 (18.93/11.87) LLIVMLLvqRSEELRSA
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