<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06311
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEESMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDFLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFGNNVRIFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETVSNAIRSADADDDVRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNLEKIFGLPKGLAIGLSCDRHRVVWSIELNTIGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRLTPLSMLSSYKLTLVYGPMLRYVCHLQWKPNEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITGFKTFLNLHISEMKAAIEAERKVSTAVHDSLMEVSDVDFSGNTFQANPNSGTGSSMVLENSMRTSTQNRLIVNQFDYLVIINLSNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQNAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDGNDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNCTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1288 |
Position | Tail |
Organism | Trichinella nativa |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | 0.005 |
Instability index | 43.24 |
Isoelectric point | 6.30 |
Molecular weight | 146342.41 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06311
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.16| 23| 28| 424| 446| 1
---------------------------------------------------------------------------
424- 446 (42.42/23.32) FTETLDLSMNLFTGKFVCRLPAF
453- 475 (42.74/23.55) FVNRIDHTMRFFTLKSCETLPAF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.92| 23| 27| 821| 846| 2
---------------------------------------------------------------------------
821- 846 (37.30/40.30) TLPDTIFRVGSEHTSNQMLYlnrMFS
850- 872 (43.62/35.92) TGPDTVRLLCKDHLCLEMRF...TFS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.23| 19| 90| 1149| 1168| 3
---------------------------------------------------------------------------
1149- 1168 (33.65/28.64) QQHAYVESSTAYWIpEMCFL
1238- 1256 (36.58/24.95) QQTAQQSNCTVYPI.ETCLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.26| 18| 34| 1073| 1090| 5
---------------------------------------------------------------------------
1073- 1090 (32.66/17.56) KFFLNE.SNL..SSVMFKFFR
1106- 1126 (22.60/10.19) KYFLEQiSSTynAAAMYAFVR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.91| 10| 26| 994| 1003| 6
---------------------------------------------------------------------------
994- 1003 (21.57/12.77) PSSRSPPEDW
1023- 1032 (23.35/14.47) PSGTHPHPEW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 137.79| 46| 427| 62| 116| 7
---------------------------------------------------------------------------
62- 116 (59.83/54.43) DRKIsIAQFaHSarqlFVRLYAILKWAR...cGAKVDLCTGIVCflDQQASMFVDTAD
486- 535 (77.96/40.90) DRRF.IIKF.HR....FENYYIVLTFNDhpddSAKVNLDFWLVC..NETVSNAIRSAD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.37| 12| 427| 578| 590| 9
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556- 567 (20.76/ 7.32) VVSETKVFHQLC
579- 590 (21.60/ 8.49) VIPELMAAFSMC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.49| 18| 25| 635| 659| 10
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625- 644 (27.58/21.89) LGIDQtyDR...NLE.KIFGLPKG
649- 670 (23.91/18.34) LSCDR..HRvvwSIElNTIGSPLG
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