<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06310
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSGDEESMDFEEKLAAFPLPSIPANQGPPFMAFGVLLDFAVQKTYQDFVILTDLLPKKSDLDRKISIAQFAHSARQLFVRLYAILKWARCGAKVDLCTGIVCFLDQQASMFVDTADRLYQMNCDVLQNARLPVFQIPTAVDVLTLGTYPRLPSVIKREFIRTADISQEEEECVLHRLNYVIERRLLPSLLTLPEGMRNFTVNNGMVTFHVAGEFEAQLTLLGQLPRTPWTLLNLRILVSDPRVTDGSDILSSLQLSFLHHLIQSRLNVSKEPIVELYRVIHCFCLSAQLDILCCQAYRLIGDFMSENLSVEEYVSSEKLVLSYWKEQNQGGVASFKVIFWINQDEPFAPLQVTHIPKSELKLPSMDTESGQLSLDNLLTETVLIRVKHRLQQLCDFLRTIKGLTCTFISDMPALSITFLPDSSFTETLDLSMNLFTGKFVCRLPAFDEDISLIAQLTEKLDDSHWNCLEDLLHQIRVRIFVNRIDHTMRFFTLKSCETLPAFLKTACEQWPVDRRFIIKFHRFENYYIVLTFNDHPDDSAKVNLDFWLVCNETVSNAIRSADADDDVRSKKNVNLLHFDLRRVVSETKVFHQLCLFSWKIQKKQCVIPELMAAFSMCENAMPFFLLMEEMERTSARYAYHQLFDGTVVLRVLGIDQTYDRNLEKIFGLPKGLAIGLSCDRHRVVWSIELNTIGSPLGDSSSFGRAVHRKITILSCTVGNESARKCLDDVLSGVRCFNALYEPVKALAGAYKSCLHRLTPLSMLSSYKLTLVYGPMLRYVCHLQWKPNEKMYILSFGVDNSVLNEEYVYFNPHSILCGHLQHWFNAVRDISALAHLLQASSAALQALTTLPDTIFRVGSEHTSNQMLYLNRMFSILPTGPDTVRLLCKDHLCLEMRFTFSGSVFMRDCGSAFGLPQMKSVKYVPITGFKTFLNLHISEMKAAIEAERKVSTAVHDSLMEVSDVDFSGNTFQANPNSGTGSSMVLENSMRTSTQNRLIVNQFDYLVIINLSNSLANDDGHAEPSSRSPPEDWTPCVVPIEIQQNAFIRICSPSGTHPHPEWSHLQKFILSVEVLEKMKEQANNFTVIRPGQLSLKCNQSEMKFFLNESNLSSVMFKFFRDGNDACTESDVQFLEKYFLEQISSTYNAAAMYAFVRMLTVCQTIRRDLLSSFLSIMNIQQHAYVESSTAYWIPEMCFLIPSPQLVPTTYLSRATLMPGGLAIVANVVQKKMLFWIKFVRVADPSHCVAFPFLYDGENNSLQVFRGTNQQTAQQSNCTVYPIETCLLRQQQTHSAFSECVVWPCIRDVMHINELIPGRS |
Length | 1315 |
Position | Tail |
Organism | Trichinella nativa |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.002 |
Instability index | 43.43 |
Isoelectric point | 6.08 |
Molecular weight | 149603.04 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06310
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 297.20| 88| 135| 301| 392| 2
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301- 349 (66.71/42.96) .........................................GDFMSENLSVEEYVS.....SEKLVLSYWK..EQNQGGVASFKVIFWINQ.DEP..FAP
350- 389 (38.98/31.01) LQVTHIPKSELKLPS.MDTESGQLSLDNLLTETVLIRVkHR...........................................................
414- 492 (98.55/69.60) LSITFLPDSSF.......TETLDLSM.NLFT..........GKFVCRLPAFDEDISliaqlTEKLDDSHWNclED...LLHQIRVRIFVNRiDHTmrFFT
493- 552 (92.96/65.14) LK......SCETLPAfLKTACEQWPVD....RRFIIKF.HR.........FENYY.........IVLTF....NDHPDDSAKVNLDFWLVC.NE......
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 273.88| 93| 719| 118| 216| 3
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118- 216 (139.85/108.90) LYQMNCDVLQN.ARLP..VFQI...PTAVDVLTLGtypRLPSVIKREfIRTADISQEEEECVLHRLNY..VIERRLLPSLLTLPEgMRN..FTVNNGMVTF...HVAgEFEA
835- 940 (134.02/83.20) LLQASSAALQAlTTLPdtIFRVgseHTSNQMLYLN...RMFSILPTG.PDTVRLLCKDHLCLEMRFTFsgSVFMRDCGSAFGLPQ.MKSvkYVPITGFKTFlnlHIS.EMKA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 85.11| 23| 135| 1037| 1062| 4
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1037- 1062 (40.07/34.33) IEIQQNAFIRicsPSGTHPHPEWSHL
1173- 1195 (45.04/28.91) MNIQQHAYVE...SSTAYWIPEMCFL
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