<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP06295
Description |
Lysine-specific demethylase 8 |
Sequence | MILLVRIGLALLQCCFGYTWSILECFFKKPKSVTDKVIVITGAARGIGKGLALLLAHLHAKIVLVDLDESTNKQTAEELRQETSACVYAYTADVTDPESMRQVANAIVTNPELGCPDVLVCSAGVLIPKLLEDHSDTIRAFYPYILKRGQGHIVAVSSYGGHFGNSYSCCYSASKFAVRGLMESLEWEIYDHGFGGEIKTTTIYPFFTRTDLLSSCNVTSDVIPVLTPEETSQGILKAILYEQTEAFIPFYGSLICYFFKGRTFKAIELEDFEAAVEICNFMLNFIWERLNTGHWSEVNISWRLLYTMVSLLLSIAHIANGRLKDALCSCDKGLLLGCPISGNILARLASLLHCKMIDTYPLEDMLINDKFDQALASMNDVCEHFEHSVPRVECPSLETFQRDFLIPQNPVVIEGALESWQAMEKWNIAYLMSKCAYRTVPIEIGSKYTNDEWSQKLLTVTDFVHEYFNPDAREKAYLAQHQLFEQITELKDDIAVPDYCCLQCAPEDVDINAWFGPANTVSPLHTDPRDNLFAQVFGQKYLRLCHPTATKNLYPITDGLMSNTSQIDMEKIDYEKFPLVKNVKFYETIVKPGDLLFIPKATGIACDVMSSAGSAAVQSSLASGLLPSPSNLYYQSLGHITGGEGISRNGSRTPVSQRRVGHFTRARHHSSCDVHSLCDGVTFERCFDSQLPPADPQIHAGGFKSGFPFSARSSSNSYRQPTLSSHLSHGNLGYLQSDCDWSADLDPLVKNGRGSNEAPGCGSVSKIVNGRMTTTNCCPADCDALREDLRVAMEKLNATMGSIKSFWSPELKRERALRKEETAKMNMLQEQLKLSLVNNQKQSVLIEQLQNELRFQCNSGRSRRFPDDGPLIGHEDYRTVCQERDMYRRDWLISSDAVKELQYQLESQRQLLLSKDESVKRLLEALHSKGVPASVAQSCAEMELAQNRIVELEEKCSRLQAHCDDLESHLQQSHDGLSSLRKDAVIESLQDEVASYEAELKRLRSGGAIHEREFTDKMVTDKEYQELKLKADKLELELGQKTVEIQALYTRLSTAEESASDFKKHLELMKESNASKDQQATLLQSDIDALRGKLESKNEMIDQKAQQITELQADKNRLLSELNLLNEQHRISEVGLSTKDRKIDLLEETIRERDCELNLIRTRLNSSPGVIQEKKLQDEINRLVQERDLWRKRFNEEHECLAIERKRDGEAHEKENKDLRIAIASLQKEISDRQVFIESQNEKINDMVRQTEALTKENSLYKELNKTNGVDLLKAEIERLNQAVDESRSEVDRLLKIIHNSEKEKNEGRESGNDSKRFHSNTENADYQSVLMHKDRRIEELEEALKESVSITAEREMAVAQQKLNSQRAEQRIAALKDELKTMQEQYDELSIQLKQLRQEKVQSDATIKTMQEERKRYVDEVMQLKGEVLLAAIEEKDAHIAFLENFHGRKSSEEIDNVKKQKEELLQRLKEENARRVKLHNDPTLNFTDHFPKRHWWPAMGIAWVYLYSDPEKSDRQDVLLDSLQTALDNMDAKQAGFFSLTSETFFSTTTTNAKPVHLFQSSEFPETTFVLVGDTLGSASTFLFAEKSITQMIRNLDGAYCTKPISKVECRGNKYVISDFTVRTSVATIASNFKGILVEIEYRPCVAMQLCGDLMKEFCTALLGSAASAPPTFVGLTKPNQRYVPIDTIFQYHCYFMHFRKMSVQTAGPNEQQSQAQPQPQQQQQQQPQQQQQQQQQQQQ |
Length | 1742 |
Position | Head |
Organism | Trichinella nativa |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Enoplea> Dorylaimia>
Trichinellida> Trichinellidae> Trichinella.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.467 |
Instability index | 48.19 |
Isoelectric point | 5.55 |
Molecular weight | 197704.86 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | cytoplasm GO:0005737 IEA:UniProtKB-SubCell
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | methyltransferase activity GO:0008168 IEA:UniProtKB-KW
oxidoreductase activity GO:0016491 IEA:InterPro
transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | methylation GO:0032259 IEA:UniProtKB-KW
regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP06295
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 850.83| 219| 221| 892| 1112| 1
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735- 894 (117.47/83.54) ......................................................................LQSDCDwsaDLDPLVKNgrgSNEapGCGSvskivngrmtttnccpadcdaLREDlrVAMEKLNATMGSI..KSfwspELKRER........ALRKEE.TAKMNMLQEQLKLSL........................VNNQKQSVLIEQLqnELRFQCNSGRSRR..F..PDDGPLIGH..EDYRTVC.QERDMYRRDW.....LIS
897- 1120 (334.47/244.42) AVKELQYQLES..QRQLLLSKDESVKRLLEAL.HSKGVPA....SVAQSCAEMELA.QNRIVELEEKCSRLQAHCD...DLESHLQQ...SHD..GLSS.....................LRKD..AVIESLQDEVASY..EA....ELKRLRSGG.....AIHEREFTDKMVTDKEYQELKLKADKLELELGQKTVEIQALYTRLSTAEESASDFKKHL..ELMKESNASKDQQATLLQSDIDALRGKL.ESKNEMIDQKAQQITELQadknrLLS
1121- 1302 (209.76/151.31) ...ELNL.LNE..QHRI.................................SEVGLStKDRKIDLLEETIR.ERDCE..lNLIRTRLN...SSP..GVIQ.....................EKK........LQDEINRLvqER....DLWRKRFNEeheclAI.ERK.RDGEAHEKENKDLRIAIASLQKEISDRQVFIESQNEKINDMVRQTEALTKEN..SLYKELN..KTNGVDLLKAEIERLNQAVdESRSE.VDRLLKIIHNSE........
1314- 1481 (189.13/135.39) DSKRFHSNTENadYQSVLMHKDRRIEELEEALkESVSITAeremAVAQQKLNSQRA.EQRIAALKDELKTMQEQYD...ELSIQLKQ...LRQ....EK.....................VQSD..ATIKTMQEERKRY..VD....EVMQLKGEV.....LLAAIEEKDAHIA...FLE.NFHGRKSSEEIDNVKKQKEELLQRLK..EENARRVKLH..........................................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 439.96| 164| 220| 113| 295| 2
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113- 225 (120.82/118.40) ...............................................................................................................LGCP...DVLVCSAGVLIPKLLedhsDTirafYP....YILKRGQGHIVAVSSYGGHFGNSYSC..CYSASKFAvRGLMESLEWEIYDhgfgGEIKTTTIYPFFTRTDLLSSCNVTSdvIPV
226- 442 (245.99/186.26) LTPEETSQGILKAILYEQtEAFIPfYGSLICYFFKGRTFKAI.ELEDFEAAVEICnfMLNFIWERLNTGHWsevniswrllytmvslllsiahiangrlkdalcscdkgllLGCPisgNILARLASLLHCKMI....DT....YPledmLINDKFDQALASMNDVCEHFEHSVPRveCPSLETFQ.RDFLIPQNPVVIE....GALESWQAMEKWNIAYLMSKCAYRT..VPI
448- 514 (73.16/40.18) YTNDEWSQKLLTVTDFVH.EYFNP.DAREKAYLAQHQLFEQItELKDDIAVPDYC..CLQCAPEDVDINAW..................................................................................................................................................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 144.74| 49| 98| 579| 633| 4
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579- 633 (71.70/61.10) LVKNVKF...YETIVKPGDllfiPK..ATGIACDVMSSAGSAA...VQSSLASGlLpSPSNL.Y
677- 734 (73.04/44.02) LCDGVTFercFDSQLPPAD....PQihAGGFKSGFPFSARSSSnsyRQPTLSSH.L.SHGNLgY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.42| 15| 18| 1535| 1552| 5
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1535- 1552 (17.87/19.15) KQAGFFSlTSEtfFSTTT
1556- 1570 (28.54/15.85) KPVHLFQ.SSE..FPETT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 59.76| 17| 447| 315| 331| 6
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315- 331 (32.01/21.32) IAHIANGRLKDALC...SCD
764- 783 (27.75/17.43) VSKIVNGRMTTTNCcpaDCD
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